| Sequence 1: | NP_001260883.1 | Gene: | shn / 36171 | FlyBaseID: | FBgn0003396 | Length: | 2587 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001101442.1 | Gene: | Hivep3 / 313557 | RGDID: | 1311252 | Length: | 2350 | Species: | Rattus norvegicus |
| Alignment Length: | 2577 | Identity: | 570/2577 - (22%) |
|---|---|---|---|
| Similarity: | 878/2577 - (34%) | Gaps: | 919/2577 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 331 GDAVRTTSLSSNSSLSPPPTTPLANG--HHLMTQQ-------QSHQQVQQQQQQQQTPP------ 380
Fly 381 -----PSVAIHEFSANFVNSNHVNAIGHEESIISNSGYKAAGRTRTPLANSNSNTNSTSNSNSNH 440
Fly 441 AANATLSPASFAQHQQLTQ-----PTTVSPGIPGGAAAPNPA----------------CEKSGRY 484
Fly 485 VCQYCNLICAKPSVLEKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAARARGLEVPADA 549
Fly 550 DDGLSDQDAELSNSSSELPSRAGSPYEEPINSPTPSPSTLSAAKSAYIQQPPLPTYMQQLPLGSP 614
Fly 615 AAGTLPPTTADNHHSATAQHRQSIDYKPYKPKFHNASLYSCSSKELQQQQQQLQIQQQQQQHQLA 679
Fly 680 QQKLSIQLPLVQQPSLAHPTLSPSTQMKMKHHINSHQIQ----------LQLQQQQSLLAQQSLL 734
Fly 735 AAMPPGGVYYLGQPSYYNQDTAAAIHQHALAIQQFQIHLAQQQQQQQQQHPPLVKATPPMQQPPS 799
Fly 800 LPPQQLV--------RANSQISSVATAPATPTPAANLSTFASSSGGKQVNVAKVQEHISKLISQN 856
Fly 857 EAIVENKEILLQKKYPKQLSRSRSFNNANSN----NASQHG------------------------ 893
Fly 894 ----SNASALHANNSQNNT------------NAQMPERETKVNLAQAIFQKQQHQLQ-------- 934
Fly 935 -------------------QQQQQQITQQQQQQLEQQ--NYYTYI-------------QQQQECQ 965
Fly 966 QQQLEP--PNG---VVKRNA----------YKPGVVM-TTPVKQQ--------QQLPP---PPSP 1003
Fly 1004 ------LPMQTMQYRQDPATPVTKIEQPTTAVPVMPLNLSAKPKPTLVTVPVSSLSTSSLAPTPT 1062
Fly 1063 TSTNPTSSSKTAPPPAQVNNSIIKNLLLNARGLAVPIGEGDD--AVYSCPICASEFRSADDL--K 1123
Fly 1124 LHNSTYCQ----------DASSSAPMSPASSPFRSNSI-----SLSLPELKSH-MANSKNPLSLA 1172
Fly 1173 KLAWSQLKTK-RSSLVLSR---------LSA--------------AQTPARTSTVTAPTV----- 1208
Fly 1209 --------------TASAPAPAV------------------ATVTAPSSA-PAPQIEALRFVDAP 1240
Fly 1241 LPSPGPLLGKTPLVDYAQQSTPRKAQDSVVITKMHEDRQFVIEAQPAKRIKTSDLVVASSSQQPT 1305
Fly 1306 SFNFSFNNQNSSNSVPELQSSKEERLRRFTSSGGSMIPISECPDLDNSPKMIRT----------- 1359
Fly 1360 -PLLSGGSFQDVSVKVNNETGSSSKERKLMALVSGSGLLGVSSG-----PQHFQFPPIN-SITAF 1417
Fly 1418 NP--LTLPPMSGGDKTTP------VTPIP----------------------------HVP----- 1441
Fly 1442 ------GMPGPGS------------LTPQ-------------MPLLPPP------PQQLQLPIPS 1469
Fly 1470 ----------------------------------------------------------SRG---- 1472
Fly 1473 --RSPNRK-----QPSPLLLGG----GSGELKALSPFGGVQNVPSEFSRQPPTPAQRQALQWNSK 1526
Fly 1527 EAPKK----APFNFLRMA--DNVKTTEPEV--------RHFNLENVISGKQQELPLTPLHVDT-P 1576
Fly 1577 NGNAP--EETSPVASASASAKSKFLRPTSLPLKPGTFTPKRHHGITPTA--NTLPLISPETPRP- 1636
Fly 1637 -------SKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMH---KLSMYSVWQVCEE 1691
Fly 1692 NQPHPLGFKLKQVMALYDSRQRMLGNGSSTAMAGSGKLSYNLVASQQIVSSPSTSSTSSAFYQGP 1756
Fly 1757 LKTPPTVTIAALSEANVAAKANEEAQAKKLETSPSGQP-----LVGGYESHEDYTYIRGRGRGRY 1816
Fly 1817 VCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGP 1881
Fly 1882 MPPDSEFLDVDMDFDQQSSTSAGGRTSSMA-----------GESDSDDYSDNESESSDTDESKSR 1935
Fly 1936 QKEHEAARGLLSLSMTPPIPQSVSPYPQLQDTPLPAASPANSIGSSGSQPKRLVCS--------- 1991
Fly 1992 ----------------------FTSPKPPFDYQKQ-------------EQYYSNPEESKPKRSVA 2021
Fly 2022 NEESAP-------MDLT-----KPRGSILLISPSPV--SVPA------------------HDLPK 2054
Fly 2055 SQAQQMHDVIFGT---------SGNESG---------------FMKTLISVSDKVRISAEMEEQA 2095
Fly 2096 KHEAEGEDVQLQTYIKEHALH---QAKIKQSQFSRSYLINTLYTAASPVMSSSSTLFTANSRPVM 2157
Fly 2158 SVNEVPSIEVHEVKTP-------------------------EAIESPRSAPEQAP---------V 2188
Fly 2189 ILAQIAQEENEE--------PNIAEPHNANLPAAVQ-------------QPDVNEFTGVLGNPTA 2232
Fly 2233 ---------PPTSSVTATSVSTTTAAPVAPSSTANSTQPAQR 2265 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| shn | NP_001260883.1 | C2H2 Zn finger | 486..506 | CDD:275368 | 15/19 (79%) |
| zf-H2C2_2 | 499..523 | CDD:290200 | 16/23 (70%) | ||
| C2H2 Zn finger | 514..536 | CDD:275368 | 14/21 (67%) | ||
| zf-C2H2 | 1816..1838 | CDD:278523 | 20/21 (95%) | ||
| C2H2 Zn finger | 1818..1838 | CDD:275370 | 18/19 (95%) | ||
| zf-H2C2_2 | 1830..1855 | CDD:290200 | 19/24 (79%) | ||
| zf-C2H2 | 1844..1868 | CDD:278523 | 17/23 (74%) | ||
| C2H2 Zn finger | 1846..1868 | CDD:275370 | 17/21 (81%) | ||
| zf-C2H2 | 2307..2328 | CDD:278523 | |||
| C2H2 Zn finger | 2308..2328 | CDD:275368 | |||
| zf-C2H2_jaz | 2333..2359 | CDD:288983 | |||
| C2H2 Zn finger | 2336..2358 | CDD:275368 | |||
| C2H2 Zn finger | 2381..2403 | CDD:275368 | |||
| Hivep3 | NP_001101442.1 | C2H2 Zn finger | 194..214 | CDD:275368 | 15/19 (79%) |
| zf-H2C2_2 | 207..231 | CDD:290200 | 16/23 (70%) | ||
| C2H2 Zn finger | 222..242 | CDD:275368 | 13/19 (68%) | ||
| zf-C2H2 | 1722..1744 | CDD:278523 | 20/21 (95%) | ||
| C2H2 Zn finger | 1724..1744 | CDD:275368 | 18/19 (95%) | ||
| zf-H2C2_2 | 1736..1761 | CDD:290200 | 19/24 (79%) | ||
| C2H2 Zn finger | 1752..1774 | CDD:275368 | 17/21 (81%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 107 | 1.000 | Domainoid score | I6377 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 319 | 1.000 | Inparanoid score | I2452 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 1 | 1.000 | - | - | otm45702 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR45944 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 7 | 7.110 | |||||