DRSC/TRiP Functional Genomics Resources

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Protein Alignment shn and Zfp729a

DIOPT Version :9

Sequence 1:NP_001260883.1 Gene:shn / 36171 FlyBaseID:FBgn0003396 Length:2587 Species:Drosophila melanogaster
Sequence 2:NP_898969.2 Gene:Zfp729a / 212281 MGIID:3036250 Length:973 Species:Mus musculus


Alignment Length:1022 Identity:191/1022 - (18%)
Similarity:301/1022 - (29%) Gaps:378/1022 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1505 PSEFSRQPPTPAQRQALQWNSKEAPKKA-----PFNF---LRMADNVKTTEP----EV--RHFNL 1555
            ||..||..         :.:|:|.|.|.     .|:|   |.:...|.|.|.    |:  :.|:.
Mouse   187 PSRLSRHK---------KIHSEEKPYKCEVCGKAFHFPSLLLVHKRVHTGEKPYKCEICDKAFHY 242

  Fly  1556 ENVISGKQQELPLTPLHVDTPNGNAPEETSPVASA----SASAKSKFLRPTSLPLKPGTFTPKRH 1616
            .:::|..::      :|    .|..|.:......|    |..:|.|.:.....|.| .....|..
Mouse   243 PSILSKHKR------IH----TGEKPYKCEECGKAFHISSFLSKHKIIHRGEKPYK-CEVCGKAF 296

  Fly  1617 HGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLS 1681
            |..:..:|...:.|.|.|...:.|      |.|:..|.|....|:.:                  
Mouse   297 HYPSRLSNHKKIHSGEKPFKCEVC------GKAFRILSLLSKHKIIH------------------ 337

  Fly  1682 MYSVWQVCEENQPHPLGFKLKQVMALYDSRQRMLGNGSSTAMAGSGKLSYNLVASQQIVSSPSTS 1746
                   .|||.     :|.:.....:|...|:    |:.|...:|:..|.....|:...|.|:.
Mouse   338 -------TEENP-----YKCEVCGKAFDYPSRL----STHAKMHTGEKPYKCEVCQKAFRSLSSL 386

  Fly  1747 S------TSSAFYQGPLKTPPTVTIAALS------------EANVAAKA-NEEAQAKKLETSPSG 1792
            |      |...:|...|.....:..:.||            :..|..|| :..:...|..|..:|
Mouse   387 SKHKRIHTEDNYYNNELCGKAFIYPSRLSKHKRICAGEKPYKCEVCGKAFHVSSLLSKHRTIHTG 451

  Fly  1793 QPLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKG 1857
            :.|                    |.|..||.....||.|..|.:.||..:||.|..|..:|....
Mouse   452 EKL--------------------YKCEVCGKAFYYPSRLSNHKKIHTGEKPFQCEVCGKAFCFPS 496

  Fly  1858 NLTKHMQSKTHFK--KCIELGINPGPMPPDSEFLDVDMDFDQQSSTSAGGRTSSMAGESDSDDYS 1920
            :|:||.:..|..|  ||.|.|                                            
Mouse   497 SLSKHKRIHTGEKPYKCKECG-------------------------------------------- 517

  Fly  1921 DNESESSDTDESKSRQKEHEAARGLLSLSMTPPIPQSVSP-----------YPQL---------Q 1965
                               :|.|.|.|||....|.....|           ||.|         :
Mouse   518 -------------------KAFRSLSSLSKHKRIHTGEKPYKCEECGKAFHYPSLLSKHKIIHTE 563

  Fly  1966 DTP-----------LPAASPANSIGSSGSQP-KRLVC--SFTSP------------KPPFDYQKQ 2004
            :.|           :|:....:.|..:|.:| |..||  :|..|            :.|::.|..
Mouse   564 EKPYKCDVCGQAFHVPSKLSHHKIIHTGEKPYKCEVCGKAFCIPLLLSKHKRVHTGENPYNSQVC 628

  Fly  2005 EQYYSNPEESKPKRSVANEESAPMDLTKPR-----------GSILLISPSPVSVPAHDLPKSQAQ 2058
            .:.:..|.:....:.|..:|       ||.           .|:|||.                :
Mouse   629 SKAFVYPSKLSKHKKVRTKE-------KPYKCEVCGKAFRFPSLLLIH----------------K 670

  Fly  2059 QMHDVIFGTSG---------NESGFMKTLISVSDKVRISAEMEEQAKHEAEGEDVQLQTYIKEHA 2114
            .||      :|         .::....:|:|...::...   |:..:.|..|:|..:.:.:.:|.
Mouse   671 GMH------TGEKPYKCEDCGKAFHYPSLLSKHKRIHTG---EKPYQCEVCGKDFHVSSSLSKHR 726

  Fly  2115 LHQAKIKQSQFSRSYLINTLYTAASPV----------MSSSSTLFTANSRPVMSVNEVPSIEVHE 2169
            :                  ::|...|.          .|||.:....|               |.
Mouse   727 I------------------IHTGEKPYKCEICGKTFRFSSSLSKHKRN---------------HT 758

  Fly  2170 VKTPEAIESPRSAPEQAPVILAQIAQEENEEPNIAEPHNANL-PAAVQQPDVNEFTGVLGNPTAP 2233
            .|.|...|....| ...|.|||:.......|    :|:|.:| ..|.....:.....::.....|
Mouse   759 GKKPYKCEECGKA-FHFPSILAKHKISHTGE----KPYNCDLCGKAFHYASLLSKHKMIHTGEKP 818

  Fly  2234 PTSSVTATSVSTTTAAPVAPSSTANSTQPAQRTVIVGEDGFKSST-------PTSKSGDLQHVSY 2291
            ....:...:..       .||..:|     .:.:..||..:|...       .:|.|   :|...
Mouse   819 HKCDICGKAFH-------YPSKLSN-----HKKIHTGEKPYKCEVCGNVFCFASSLS---KHKRI 868

  Fly  2292 GRGVPPAPIAGDARPTCTMCSKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSE 2356
            ..|..|.        .|.:|.|.|.....|:.|..||..|:.:||:.|..:|.....|.||    
Mouse   869 HTGENPY--------KCEVCGKAFYYPSLLSKHKIIHTGEKPYKCDLCGKAFHYPSLLSKH---- 921

  Fly  2357 AHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTH 2403
                ||:.|         ..:|::|..|..||.....|:||  .|.|
Mouse   922 ----KVIHT---------GKKPYKCEVCGKAFHYPSRLSKH--KKIH 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shnNP_001260883.1 C2H2 Zn finger 486..506 CDD:275368
zf-H2C2_2 499..523 CDD:290200
C2H2 Zn finger 514..536 CDD:275368
zf-C2H2 1816..1838 CDD:278523 8/21 (38%)
C2H2 Zn finger 1818..1838 CDD:275370 7/19 (37%)
zf-H2C2_2 1830..1855 CDD:290200 9/24 (38%)
zf-C2H2 1844..1868 CDD:278523 7/23 (30%)
C2H2 Zn finger 1846..1868 CDD:275370 6/21 (29%)
zf-C2H2 2307..2328 CDD:278523 6/20 (30%)
C2H2 Zn finger 2308..2328 CDD:275368 6/19 (32%)
zf-C2H2_jaz 2333..2359 CDD:288983 7/25 (28%)
C2H2 Zn finger 2336..2358 CDD:275368 6/21 (29%)
C2H2 Zn finger 2381..2403 CDD:275368 8/21 (38%)
Zfp729aNP_898969.2 KRAB 15..73 CDD:214630
KRAB 15..54 CDD:279668
C2H2 Zn finger 93..110 CDD:275368
C2H2 Zn finger 121..141 CDD:275368
C2H2 Zn finger 149..169 CDD:275368
C2H2 Zn finger 177..197 CDD:275368 4/18 (22%)
zf-H2C2_2 190..213 CDD:290200 6/31 (19%)
C2H2 Zn finger 205..225 CDD:275368 3/19 (16%)
zf-H2C2_2 218..242 CDD:290200 6/23 (26%)
COG5048 229..670 CDD:227381 106/597 (18%)
C2H2 Zn finger 233..253 CDD:275368 3/25 (12%)
zf-H2C2_2 246..269 CDD:290200 5/32 (16%)
C2H2 Zn finger 261..281 CDD:275368 4/19 (21%)
C2H2 Zn finger 289..309 CDD:275368 3/19 (16%)
zf-H2C2_2 302..324 CDD:290200 6/27 (22%)
C2H2 Zn finger 317..337 CDD:275368 6/25 (24%)
C2H2 Zn finger 345..365 CDD:275368 4/23 (17%)
C2H2 Zn finger 373..393 CDD:275368 4/19 (21%)
C2H2 Zn finger 404..421 CDD:275368 2/16 (13%)
C2H2 Zn finger 429..449 CDD:275368 5/19 (26%)
C2H2 Zn finger 457..477 CDD:275368 7/19 (37%)
zf-H2C2_2 470..492 CDD:290200 8/21 (38%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
zf-H2C2_2 497..522 CDD:290200 10/87 (11%)
COG5048 509..951 CDD:227381 106/616 (17%)
C2H2 Zn finger 513..533 CDD:275368 9/82 (11%)
zf-H2C2_2 525..550 CDD:290200 5/24 (21%)
C2H2 Zn finger 541..561 CDD:275368 3/19 (16%)
C2H2 Zn finger 569..589 CDD:275368 2/19 (11%)
C2H2 Zn finger 597..617 CDD:275368 4/19 (21%)
C2H2 Zn finger 626..645 CDD:275368 2/18 (11%)
C2H2 Zn finger 653..673 CDD:275368 4/35 (11%)
C2H2 Zn finger 681..701 CDD:275368 2/19 (11%)
zf-H2C2_2 694..717 CDD:290200 5/25 (20%)
C2H2 Zn finger 709..729 CDD:275368 4/37 (11%)
zf-H2C2_2 721..744 CDD:290200 3/40 (8%)
C2H2 Zn finger 737..757 CDD:275368 4/34 (12%)
zf-H2C2_2 749..773 CDD:290200 7/39 (18%)
C2H2 Zn finger 765..785 CDD:275368 6/20 (30%)
C2H2 Zn finger 793..813 CDD:275368 2/19 (11%)
zf-H2C2_2 806..830 CDD:290200 1/30 (3%)
C2H2 Zn finger 821..841 CDD:275368 3/31 (10%)
C2H2 Zn finger 849..869 CDD:275368 3/22 (14%)
zf-H2C2_2 861..886 CDD:290200 9/35 (26%)
C2H2 Zn finger 877..897 CDD:275368 6/19 (32%)
zf-H2C2_2 890..914 CDD:290200 9/23 (39%)
C2H2 Zn finger 905..925 CDD:275368 8/27 (30%)
C2H2 Zn finger 933..953 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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