Sequence 1: | NP_001260883.1 | Gene: | shn / 36171 | FlyBaseID: | FBgn0003396 | Length: | 2587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005158638.1 | Gene: | hivep2b / 100536055 | ZFINID: | ZDB-GENE-130530-562 | Length: | 1798 | Species: | Danio rerio |
Alignment Length: | 2120 | Identity: | 466/2120 - (21%) |
---|---|---|---|
Similarity: | 745/2120 - (35%) | Gaps: | 634/2120 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 328 QASG--DAVRTTSLSSNSSLSPPP---TTPLANGHHL--MTQQQSHQQVQQQQQQQQTPPPSVAI 385
Fly 386 HEFSANFVNSNHVNAIGHEESIISNSGYKAAGRTRTPLANSNSNTNSTSNSNSNHAANATLSPAS 450
Fly 451 FAQHQQLTQPTTVSPGIPGGAAAPNPACEKSGRYVCQYCNLICAKPSVLEKHIRAHTNERPYPCD 515
Fly 516 TCGIAFKTKSNLYKHCRSRSHAARARGLEVPADAD--------DGLSDQDAELSNSSSE-----L 567
Fly 568 PSRAGSPYEEPINSPTPSPSTLSAAKSAYIQQPPLPTYMQQLPLGSPAAGTLPPTTADNHHSATA 632
Fly 633 QHRQSIDYKPYKPKFHNASLYSCSSKELQQQQQQLQI---------------QQQQQQHQLAQQK 682
Fly 683 LSIQLPLVQQPSLAHPTLSPSTQMKMKHHINSHQIQLQLQQQQSLLAQQSLLAAMPPGGVYYLGQ 747
Fly 748 PSYYNQDTAAAIHQHAL-AIQQFQIHLAQQQQQQQQQHPPLVKATPPMQQPPS------LPPQQL 805
Fly 806 VRANSQISSVATAPATPTPAANLSTFASSSGGKQVNVAKVQ-----------EHI---------- 849
Fly 850 -------------------SKLISQN-------------------------EAIVENKEILLQKK 870
Fly 871 YPKQL--------SRSRSFNNANSNNASQHGSNA-SALHANNSQNNTNAQMPERETKVNLAQAI- 925
Fly 926 -FQKQQHQLQQQQQQQITQQQQQQLEQQNYYTYIQQQQECQQQQLEPPNGVVKRNAYKPGVVMTT 989
Fly 990 PVKQQQQLPPPPSPLPMQTMQYRQDPATPVTKIEQPTTAVPVMPLNLSAKPKPTLVTVPVSSLST 1054
Fly 1055 S------SLAPTPTTSTNPTSSSKTAPPPAQVNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICA 1113
Fly 1114 SEFRSA-DDLKLHNSTYCQDASSSAPMSPAS--SPFRSNSISLSLPELKSHMANSKNPLSLAKLA 1175
Fly 1176 WSQLKTKRSSLVLSRLSAAQTPARTSTVTAPTVTASAPAPAVATVTAPSSAPAPQIEALRFVDAP 1240
Fly 1241 LPSPGPLLGKTPLVDYAQQSTPRKAQDSVVITKMHEDRQFVIEAQPAKRIKTSDLVVASSSQ--Q 1303
Fly 1304 PTSFNFSFNNQNSSNSVPELQSSKEERLRRFTSSGGSMIPISECPDLDNSPKM---IRTPLLSGG 1365
Fly 1366 SFQDVSVKVNNETGS---SSKERKLMALVSGSGLLGVSSGPQHFQFPPINSITAFNPLTLPPMS- 1426
Fly 1427 --GGDKTTPVTPIPHVPGMPGPGSLTPQMPLLPPPPQQLQLPIPSSRGRSPNRKQPSPLLLGGGS 1489
Fly 1490 GELKALSPFGGV--------------QNVPSEFSRQPPTPAQRQALQWNSKEAPKKAPFNFLRMA 1540
Fly 1541 DNVKTTEPEVRHFNLENVISGKQQELPLTPLHVDTPN----GNAPEETSPVASASASAKSKFLRP 1601
Fly 1602 TSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYL-----GLKCSTKM 1661
Fly 1662 FYCTVNCPQPSYVAGMHKLSMYSVWQV-CEENQPHPLGFKLKQVMALYDSRQRMLGNGSSTAMAG 1725
Fly 1726 SGKLSYNLVASQQIVSSPSTSSTSSAFYQGPLKTPPTVTIA------------ALSEANVAAKA- 1777
Fly 1778 NEEAQAKKLETSPSGQPLV-GGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDV 1841
Fly 1842 RPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINP----------------GPMPPDS---- 1886
Fly 1887 EFLDVDMDFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRQKEHEAARGLLSLSMT 1951
Fly 1952 PP-----IPQSVS-----PYPQLQDTPLPAASPANSIGSSGSQPKRLVCSF--TSPK---PPFDY 2001
Fly 2002 QKQEQYYSNPEESKPKRS-VANEESAPMDLTKPRGSILL---ISP----SPVSVPAHDLPKSQAQ 2058
Fly 2059 Q---MHDVIFGTSGNESGFM--KTLISVSDKVRISAEMEEQAKHE--AEGEDVQL---------- 2106
Fly 2107 --------QTYIKEH-ALHQAKIKQSQFSRSYLINTLYTAASPVMSSSSTLFTANSRPVMSVNEV 2162
Fly 2163 PSIEVHEVKTPEAIESPRSAPEQAPVILAQIAQEENEEPN 2202 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shn | NP_001260883.1 | C2H2 Zn finger | 486..506 | CDD:275368 | 15/19 (79%) |
zf-H2C2_2 | 499..523 | CDD:290200 | 16/23 (70%) | ||
C2H2 Zn finger | 514..536 | CDD:275368 | 14/21 (67%) | ||
zf-C2H2 | 1816..1838 | CDD:278523 | 18/21 (86%) | ||
C2H2 Zn finger | 1818..1838 | CDD:275370 | 17/19 (89%) | ||
zf-H2C2_2 | 1830..1855 | CDD:290200 | 18/24 (75%) | ||
zf-C2H2 | 1844..1868 | CDD:278523 | 17/23 (74%) | ||
C2H2 Zn finger | 1846..1868 | CDD:275370 | 17/21 (81%) | ||
zf-C2H2 | 2307..2328 | CDD:278523 | |||
C2H2 Zn finger | 2308..2328 | CDD:275368 | |||
zf-C2H2_jaz | 2333..2359 | CDD:288983 | |||
C2H2 Zn finger | 2336..2358 | CDD:275368 | |||
C2H2 Zn finger | 2381..2403 | CDD:275368 | |||
hivep2b | XP_005158638.1 | C2H2 Zn finger | 122..142 | CDD:275368 | 15/19 (79%) |
zf-H2C2_2 | 135..159 | CDD:316026 | 16/23 (70%) | ||
C2H2 Zn finger | 150..170 | CDD:275368 | 13/19 (68%) | ||
zf-C2H2 | 1350..1372 | CDD:306579 | 18/21 (86%) | ||
C2H2 Zn finger | 1352..1372 | CDD:275370 | 17/19 (89%) | ||
zf-C2H2_2 | <1378..>1404 | CDD:315435 | 18/25 (72%) | ||
C2H2 Zn finger | 1380..1398 | CDD:275370 | 14/17 (82%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 108 | 1.000 | Domainoid score | I6359 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm25148 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45944 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.060 |