Sequence 1: | NP_001260883.1 | Gene: | shn / 36171 | FlyBaseID: | FBgn0003396 | Length: | 2587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937260.1 | Gene: | hivep2 / 100495428 | XenbaseID: | XB-GENE-485854 | Length: | 2376 | Species: | Xenopus tropicalis |
Alignment Length: | 2623 | Identity: | 553/2623 - (21%) |
---|---|---|---|
Similarity: | 900/2623 - (34%) | Gaps: | 865/2623 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 269 SNSSIINSQQTTVNATP-------ATDEAPLGDRS-------NISRYLHKK-------FKRLAST 312
Fly 313 TEVDSWSATNGGGALQASGDAVRTTSLSSNSSLSPPPTTPLANGHHLMTQQQSHQQVQQQQQQQQ 377
Fly 378 ----TPPPSVAIHEFSANFVNSNHVNAIGHEESIISNSGYKAAGRTRTPLANSNSNTNSTSNSNS 438
Fly 439 NHAANATLSPASFAQHQQLTQPTTVSPGIPGGAAAPNPACEKSGRYVCQYCNLICAKPSVLEKHI 503
Fly 504 RAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAARARGL------------------------- 543
Fly 544 ---EVPADADDGL-------SDQDAELSNSSSEL---------PSRAGSPYEEPI-NSPTPSPST 588
Fly 589 LSAAKSAYIQQPPLP-----------TYMQQLPL---------GSPAAGTLPPTTADNHHSATAQ 633
Fly 634 HRQSIDYKPYKPKFHNASLY-------------SCSSKE----------LQQQQQQLQIQQQQ-- 673
Fly 674 ---------------------QQHQL----AQQKLSIQLPLVQQPS--LA---HPTLSPSTQM-- 706
Fly 707 -----------KMKHHI------------------NSHQIQLQLQ-------------------- 722
Fly 723 ------------QQQSLLAQQSLLAAMPPG--GVYYLGQPSYYNQDTAAAIHQHALAIQQFQIHL 773
Fly 774 AQQQQQQQQQH---------------PPLVK-------------------ATPPMQQPPSLPPQQ 804
Fly 805 LVRANSQISSVATA-----------PATPTPAANLSTFASSSGGKQVNVAKVQEHISKLISQNEA 858
Fly 859 IVENK---EILLQKKYPKQLSRSRSFNNANSNN--ASQHGSNASALHANNSQNNTNAQMPERETK 918
Fly 919 VNLAQAIFQKQQHQLQQQQQQQITQQQQQQLEQQNYYTY--IQQQQECQQQQLEPPNGVVKRNAY 981
Fly 982 KPGVVMTTPVKQQQQLPPPPSPLPMQTMQYRQDPATPVTKIEQPTTAVPVMPLNLSAKPKPTLVT 1046
Fly 1047 VPVSSLSTS------SLAPTPTTSTNPTSSSKTA-----PPPAQVNNSIIKNLLLNARGLAVPIG 1100
Fly 1101 EGDDAVYS---------------------CPICAS--EFRSADDLKLHNSTYCQDASSSAPMSPA 1142
Fly 1143 SSP---------FRSNSISLSLPE---LKSHMANSKNPLSLAKLAWSQLKTKRSSLVLSRLS-AA 1194
Fly 1195 QTPARTSTVTAPTVTASAPAPAVATVTAPSSAPAPQIEALRFVDAPLPSPG---PLLGKTPLVDY 1256
Fly 1257 AQQSTPRKAQDSVVITKMHEDRQFVIEAQPAKRIKTSDLVVASSSQQPTSFNFSFNNQNSSNSVP 1321
Fly 1322 ELQSSKEERLRRFTS----------------------SGGSMIPISECPDLDNSPKMIRTPLLSG 1364
Fly 1365 G-----SFQDVSVKVNNET----------GSSSKERKLMALVSGSGLLG-VSSGPQ-----HFQF 1408
Fly 1409 PPINSI--------------TAFNPLTLPPMSGGDKTTPVTPIPHVPG-------MPGP-GSLTP 1451
Fly 1452 QMPLLPPPPQ-QLQLPIPSSRGRSPNRKQPSPLLLGGGSGELKALSPFGGVQNVPSEFSRQPPTP 1515
Fly 1516 AQR---------QALQWNSKEAPKKAPFNFLRMADNVKTTEPEVRHFNLENVISGKQQE----LP 1567
Fly 1568 -----LTPLHVDTPN------GNAPEETSPVASAS-------ASAKSKFLRPTSLPLKPGTFTPK 1614
Fly 1615 RHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYV-AGMH 1678
Fly 1679 KLSMYSVWQVCEENQPHPLGFKLKQVMALYDSRQRMLGNGSSTAMA---GSGKLSYNLVASQQIV 1740
Fly 1741 SSPSTSSTSSAFYQGPLKTPPTVTIAALSEANVAAKANE----EAQAKKLETSPSGQPL-----V 1796
Fly 1797 GGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTK 1861
Fly 1862 HMQSKTHFKKCIELGINPGPM----PPDSEFLDVDMDFDQQSSTSAGGRTSSMAGESDSDDYSDN 1922
Fly 1923 ESESSDTDESKSRQKEHEAARGLLSLSMTPPI-PQSVSPY-PQLQDTPLPA------ASPANSIG 1979
Fly 1980 SS------GSQP---------KRLVCS-------------------------------------- 1991
Fly 1992 FTSPK----------PPFDY-----QKQEQYYSNPEESKPKRSVA-NEESAPMDLTKPRGSILL- 2039
Fly 2040 --------ISP-------SPVSVPAHDLPKSQAQQMHDVIFGTSGNESGFMKTLISVSDKVRI-- 2087
Fly 2088 ------------------------------SAEMEEQAKHEAEGEDVQL-QTYIKEH-ALH---- 2116
Fly 2117 -QAKIKQSQFSRSYLINTLYTAASPVMSSSSTLF--TANSRPVMSVNEVPSIEVHEVKTPEAIES 2178
Fly 2179 PRSAPEQAPVILAQIAQ---EENEEPNIAEPHNANLPAAVQQPDVNEFTGVLGNPTAPPTSSVTA 2240
Fly 2241 TSVSTTTAAPVAPSSTANSTQPAQRTVIVGEDGFKSSTPTSKSGDLQHVSYGRGVPPAPIAGDAR 2305
Fly 2306 PTCTMCSKTFQRQHQLTLHMNIH 2328 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shn | NP_001260883.1 | C2H2 Zn finger | 486..506 | CDD:275368 | 14/19 (74%) |
zf-H2C2_2 | 499..523 | CDD:290200 | 16/23 (70%) | ||
C2H2 Zn finger | 514..536 | CDD:275368 | 14/21 (67%) | ||
zf-C2H2 | 1816..1838 | CDD:278523 | 19/21 (90%) | ||
C2H2 Zn finger | 1818..1838 | CDD:275370 | 18/19 (95%) | ||
zf-H2C2_2 | 1830..1855 | CDD:290200 | 19/24 (79%) | ||
zf-C2H2 | 1844..1868 | CDD:278523 | 17/23 (74%) | ||
C2H2 Zn finger | 1846..1868 | CDD:275370 | 17/21 (81%) | ||
zf-C2H2 | 2307..2328 | CDD:278523 | 2/20 (10%) | ||
C2H2 Zn finger | 2308..2328 | CDD:275368 | 2/19 (11%) | ||
zf-C2H2_jaz | 2333..2359 | CDD:288983 | |||
C2H2 Zn finger | 2336..2358 | CDD:275368 | |||
C2H2 Zn finger | 2381..2403 | CDD:275368 | |||
hivep2 | XP_002937260.1 | C2H2 Zn finger | 185..205 | CDD:275368 | 14/19 (74%) |
zf-H2C2_2 | 198..222 | CDD:290200 | 16/23 (70%) | ||
C2H2 Zn finger | 213..233 | CDD:275368 | 13/19 (68%) | ||
zf-C2H2 | 1743..1765 | CDD:278523 | 19/21 (90%) | ||
C2H2 Zn finger | 1745..1765 | CDD:275370 | 18/19 (95%) | ||
zf-H2C2_2 | 1757..1782 | CDD:290200 | 19/24 (79%) | ||
C2H2 Zn finger | 1773..1791 | CDD:275370 | 14/17 (82%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I11036 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm48789 | |
Panther | 1 | 1.100 | - | - | O | PTHR45944 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3898 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.130 |