Sequence 1: | NP_001260883.1 | Gene: | shn / 36171 | FlyBaseID: | FBgn0003396 | Length: | 2587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012812809.1 | Gene: | hivep3 / 100489803 | XenbaseID: | XB-GENE-482557 | Length: | 2140 | Species: | Xenopus tropicalis |
Alignment Length: | 2487 | Identity: | 530/2487 - (21%) |
---|---|---|---|
Similarity: | 809/2487 - (32%) | Gaps: | 959/2487 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 379 PPPSVAIHEFSANFVNSNHVNAIGHEESIISNSGYKAAGR---TRTPLANSNSNTNSTS------ 434
Fly 435 NSNSNHAANATL---------SPAS--FAQHQQLTQPT---------------TVSPGIPGGAAA 473
Fly 474 PNPACEKSGRYVCQYCNLICAKPSVLEKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAA 538
Fly 539 RARGLEVPADADDGLSDQDAELSNSSSELPSRAGSPYEEPINSPTPSPSTLSAAKSAYIQQPPLP 603
Fly 604 TYMQQLPLGSPAAGTLPPTTADNHHSATAQHRQSIDYKPYKPKFHNASLYSCSSKELQQQQQQLQ 668
Fly 669 IQQQQQQHQLAQQKLSIQLPLVQQPSLA----------HPTLSPSTQMKMKHHINSHQIQLQLQQ 723
Fly 724 QQSLLAQQSLLAAMPPGGVYYLGQPSYYNQDTAAAIHQHALAIQQFQIHLAQQQQQQQQQHPPLV 788
Fly 789 KA---------------------TPPMQQ-----PPSLPPQQLVRANSQISSVATAPATPTPAAN 827
Fly 828 LSTFASSSGGKQVNVAKVQEHISKLISQNEAIVENKEILLQKKYPKQLSRSRSFNNANSNNASQH 892
Fly 893 GSNASALHANNSQNNTNAQMPERETKVNLAQAIFQKQQHQ-LQQQQQQQITQQQQQQLEQQNYYT 956
Fly 957 YIQQQQECQQQQLEPPNGVVKRNAYKPGVVMTTPVKQQQQLPPP----PSPLPMQTMQYRQDPAT 1017
Fly 1018 PVTKIEQPTTAVPVMPLNLSAKPKPTLVTVPVSSLSTSSLAPTPTTSTNPTSSSKTAPPPAQVNN 1082
Fly 1083 SI-IKNLLLNARGLAVPIGEGDDAVYSCPICASEFRSADDLKLHNSTYCQD-------------- 1132
Fly 1133 ------------------------------------------------------ASSSAPMSPAS 1143
Fly 1144 SPFR---------------SNSISLS-----LPELKS--------------HMANSKNPLSLAKL 1174
Fly 1175 AWSQLKTKRSSLVLSRLSAAQTP-------ARTSTVTAPTVTASAPAPAVATVTAPSSAPAPQIE 1232
Fly 1233 ALRFVDAPLPSPGPLLGKTPLVDYAQQSTPRKAQ---------------DSVVITK--------- 1273
Fly 1274 --------MHEDRQFVIEAQ------PAKRIKTSDLVVAS------------SSQQPT------- 1305
Fly 1306 ----SFNFSFNNQNS--SNSVPELQSSKEERLRRFTSSGGSMIP-ISECPDLDNSPKMIR----- 1358
Fly 1359 ------TPLLSGGSFQDVSVKVNNETGSSSKERKLMALVSGSGLLGVSSGPQHFQFP-------- 1409
Fly 1410 -----------PINSITAFNPLTLPPMSGGDKTTPVTPIPHVPGMP-GPGSLTPQMPLLPP---- 1458
Fly 1459 PPQQLQ----------------------LPIPSSRGRSPNRKQP--------SPLLLGGGSGELK 1493
Fly 1494 A-LSPFGGVQNVPSE---FSRQPPTPAQRQALQWNSKE-------------APKKAPFNFLRMAD 1541
Fly 1542 NVKTTEPE--VRHFN----------LENVISGKQQE--LPLTPLHVD----TPNGNAP---EETS 1585
Fly 1586 ---PVASASASA------------KSKFLRPT-SLPLKPGTFTPKR------------------- 1615
Fly 1616 ----------------------------HHGITPTANTLPLISPETPRPSK------------SC 1640
Fly 1641 ---------------------------VQLYLNG--------HAYTYLGLKCSTKMFYCTVNCPQ 1670
Fly 1671 PSYVAGM-HKLSMYSVWQVCEENQPHPLGFKLKQVMALYDSRQRMLGNGSSTAMAGSGKLSYNLV 1734
Fly 1735 ASQQIVSSPSTSSTSSAFYQGPLKTPPTVTIAALSEANVAAKANEEAQAKKLETSPSGQP----- 1794
Fly 1795 ------------LVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCS 1847
Fly 1848 HCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPPDSEFLDVD---MDFDQQSSTSAGGRTSS 1909
Fly 1910 MAGESDSDDYSDNESESSDTDESKSRQKEH----------EAARGLLSLSMTPPIPQSVSPYPQL 1964
Fly 1965 Q---------DTPLPAA---------SPANSI-GSSGSQPKR---LVCSFTSPK--------PPF 1999
Fly 2000 DYQKQEQYYSNPEESKPKRSVANEESAPMDLTKPRGSILLISPSPVSVP--AHDLPKSQAQQMHD 2062
Fly 2063 VIFGTSGNESGFMKTLISVSDKVRISAEMEEQAKHEAEGEDVQ------LQTYIK---------- 2111
Fly 2112 ------EHALHQAKIKQSQFSRSYLINTLYTAASP--VMSSSSTLFTANSRPVMSVNEVPSIEVH 2168
Fly 2169 EVKTP------EAIESPRSAPEQAPVILAQIAQEENEEPNIAEPHNANLPAA----VQQPDVNEF 2223
Fly 2224 TGVLGNPTA-----PPTSSVTATSVSTTTAAPVAPSSTANSTQPAQRTVIVGEDGFKSSTP---- 2279
Fly 2280 -TSKSGDL---QHVSYG 2292 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shn | NP_001260883.1 | C2H2 Zn finger | 486..506 | CDD:275368 | 15/19 (79%) |
zf-H2C2_2 | 499..523 | CDD:290200 | 16/23 (70%) | ||
C2H2 Zn finger | 514..536 | CDD:275368 | 14/21 (67%) | ||
zf-C2H2 | 1816..1838 | CDD:278523 | 20/21 (95%) | ||
C2H2 Zn finger | 1818..1838 | CDD:275370 | 18/19 (95%) | ||
zf-H2C2_2 | 1830..1855 | CDD:290200 | 19/24 (79%) | ||
zf-C2H2 | 1844..1868 | CDD:278523 | 18/23 (78%) | ||
C2H2 Zn finger | 1846..1868 | CDD:275370 | 18/21 (86%) | ||
zf-C2H2 | 2307..2328 | CDD:278523 | |||
C2H2 Zn finger | 2308..2328 | CDD:275368 | |||
zf-C2H2_jaz | 2333..2359 | CDD:288983 | |||
C2H2 Zn finger | 2336..2358 | CDD:275368 | |||
C2H2 Zn finger | 2381..2403 | CDD:275368 | |||
hivep3 | XP_012812809.1 | C2H2 Zn finger | 168..188 | CDD:275368 | 15/19 (79%) |
zf-H2C2_2 | 181..205 | CDD:404364 | 16/23 (70%) | ||
C2H2 Zn finger | 196..216 | CDD:275368 | 13/19 (68%) | ||
zf-C2H2 | 1648..1670 | CDD:395048 | 20/21 (95%) | ||
C2H2 Zn finger | 1650..1670 | CDD:275370 | 18/19 (95%) | ||
zf-H2C2_2 | 1662..1687 | CDD:404364 | 19/24 (79%) | ||
C2H2 Zn finger | 1678..1696 | CDD:275370 | 15/17 (88%) | ||
PHA03247 | <1770..2137 | CDD:223021 | 84/437 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I11036 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm48789 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45944 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.100 |