DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12391 and Zscan29

DIOPT Version :10

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001277748.1 Gene:Zscan29 / 99334 MGIID:2139317 Length:834 Species:Mus musculus


Alignment Length:565 Identity:125/565 - (22%)
Similarity:205/565 - (36%) Gaps:145/565 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 EGCQESSNKKDLQESAAKDDFSKEKSGEDGE-----KDTDKEKKATHLHEDNNDDAEKDGDEADA 157
            |.|:  :..|.||:|     :.|.|||...:     ::.:....|..:....|...|.....|.|
Mouse   289 EQCR--TKFKGLQKS-----YRKVKSGHPPDTCPFFEEMEALMSAQVISLPINGLEEAASHSAQA 346

  Fly   158 EDEDDVEKPEDEDGT-EEGDEAIEEDEDALDED---EDPN------------------EEVEEI- 199
            ..:.:.|||...|.. |:|:|||.|..|:.|.:   :||:                  ||.:.. 
Mouse   347 GSDAETEKPGQRDWQHEDGEEAIAERSDSDDPEATPQDPDNPPAPVLFRSPSGVHWGYEETKTYL 411

  Fly   200 ----EPDFET------------GTDAE-----GELITGDEPGDLADVPIRERKKEEPVDEDQCRV 243
                |..|..            ||.||     |.|.|          |.:.|.|.:.:.....:|
Mouse   412 AILSETQFYEALQNCHRNSQLYGTVAERLWEYGFLRT----------PEQCRTKFKSLQTSYRKV 466

  Fly   244 CTSKEELVCLFKKQIDATPADMLLVICPNVSILPKDFMPQFICTKCMGSLTIAIQLRKQLETTDQ 308
            ...:....|.|.:::||       ::...|:..|.|...:...:.|: ..|...:..||.|.|::
Mouse   467 KNGQALETCPFFEEMDA-------LVSAQVAAPPSDDQEKETVSCCL-QRTSEAEPEKQDEDTEE 523

  Fly   309 ELRKRLSRSKNKVRRPRGYVVIDAPVTDSS----------EDEDELD--------------DEFK 349
            :     |..::....|...|:..|||...|          |:..:.|              .|.|
Mouse   524 D-----SDDEDDTEIPPEAVITRAPVLFQSPSGFEAGFENEENSKRDISEEVQLHRTLLARSERK 583

  Fly   350 VSDVAGTTSADSDSADSDDSEKEK----------------------KKPGPRGRPRKKPLKRGTD 392
            :|.....:.|..:.. |.:|:.||                      ::||...||.|. :|.|..
Mouse   584 ISHHVNQSKASKNKC-SSESQWEKTQREEQRQLAFPEKNIGKVLTYQRPGLEDRPYKY-VKYGKS 646

  Fly   393 SDGEPSSAQKKKYQPSSTASVGPFECPNCDLTFSRKQSYVLHRKTH--ERIEHACPICGKKFKVE 455
            |    .|....:| |.|.....|::|.:|..:|||....:.|::.|  |: .:.|..|||.|:..
Mouse   647 S----GSNSHLRY-PVSHEVENPYKCADCGKSFSRSARLIRHQRIHTGEK-PYKCLDCGKGFRDS 705

  Fly   456 WAYKTHMQRHEQERAHFRCELCPKIFRLRAELKHHMAQRHDEHGFIYECKRCQRTFLTQQRLQRH 520
            ..:.||.:.|..|:. ::|:.|.|.|...:.|..|......|..  |:|:.|.::|........|
Mouse   706 SNFITHRRIHTGEKP-YQCDECGKRFNQSSSLIIHQRTHTGEKP--YQCEECGKSFNNSSHFNAH 767

  Fly   521 QAVGCQRHKEDSVRIKEEQSRFKQESRSKD-DRHHGNNSSKRRPG 564
            :.:    |..:...:..:..  |..|:|.| ..||..::.|:..|
Mouse   768 RRI----HTGERPHVCPDCG--KSFSKSSDLHAHHRTHTGKKPYG 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 2A1904 <9..240 CDD:273344 43/190 (23%)
zf-AD 240..312 CDD:214871 14/71 (20%)
PRK05580 <416..>449 CDD:455857 9/34 (26%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-C2H2 443..465 CDD:395048 7/21 (33%)
C2H2 Zn finger 445..465 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..491 CDD:275368 5/16 (31%)
C2H2 Zn finger 504..521 CDD:275368 3/16 (19%)
Zscan29NP_001277748.1 SCAN 13..123 CDD:128708
Myb_DNA-bind_4 238..319 CDD:463994 10/36 (28%)
Myb_DNA-bind_4 399..480 CDD:463994 17/90 (19%)
COG5048 <663..823 CDD:227381 39/154 (25%)
C2H2 Zn finger 667..687 CDD:275368 6/19 (32%)
C2H2 Zn finger 695..715 CDD:275368 7/19 (37%)
C2H2 Zn finger 723..743 CDD:275368 6/19 (32%)
C2H2 Zn finger 751..771 CDD:275368 4/23 (17%)
C2H2 Zn finger 779..799 CDD:275368 6/21 (29%)
C2H2 Zn finger 807..827 CDD:275368 125/565 (22%)
Blue background indicates that the domain is not in the aligned region.

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