DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12391 and SNAI1

DIOPT Version :9

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_005976.2 Gene:SNAI1 / 6615 HGNCID:11128 Length:264 Species:Homo sapiens


Alignment Length:184 Identity:48/184 - (26%)
Similarity:73/184 - (39%) Gaps:27/184 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 ADSDSADSDDSEKEKKKPGPRGRPRKKPLKRGTDSDGEPSSAQKKKYQ--------PSSTASVG- 414
            |:..|...:||.|..:.|.|   |...|   .:.|....||.:.:.|.        |...|.:. 
Human    86 AELTSLSDEDSGKGSQPPSP---PSPAP---SSFSSTSVSSLEAEAYAAFPGLGQVPKQLAQLSE 144

  Fly   415 --------PFECPNCDLTFSRKQSYVLHRKTHERIEHACPICGKKFKVEWAYKTHMQRHEQERAH 471
                    .|.|..|:..:....:..:|.::| .:...|..|||.|...|..:.|::.|..|:. 
Human   145 AKDLQARKAFNCKYCNKEYLSLGALKMHIRSH-TLPCVCGTCGKAFSRPWLLQGHVRTHTGEKP- 207

  Fly   472 FRCELCPKIFRLRAELKHHMAQRHDEHGFIYECKRCQRTFLTQQRLQRHQAVGC 525
            |.|..|.:.|..|:.|:.|:....|...  |:|:.|.|||.....|.:||..||
Human   208 FSCPHCSRAFADRSNLRAHLQTHSDVKK--YQCQACARTFSRMSLLHKHQESGC 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 zf-AD 240..313 CDD:285071
zf-C2H2 416..438 CDD:278523 4/21 (19%)
C2H2 Zn finger 418..438 CDD:275368 3/19 (16%)
zf-C2H2 443..465 CDD:278523 7/21 (33%)
C2H2 Zn finger 445..465 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..491 CDD:275368 5/16 (31%)
C2H2 Zn finger 504..521 CDD:275368 6/16 (38%)
SNAI1NP_005976.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SNAG domain. /evidence=ECO:0000305|PubMed:20389281, ECO:0000305|PubMed:21300290 1..20
Required and sufficient for interaction with KDM1A. /evidence=ECO:0000269|PubMed:20389281, ECO:0000269|PubMed:23721412 2..7
LATS2 binding 10..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..115 9/34 (26%)
Destruction motif 95..100 3/4 (75%)
Required for FBXL14-triggered degradation 120..151 4/30 (13%)
Required for nuclear localization and interaction with KPNB1, NOTCH1 and PARP1. /evidence=ECO:0000269|PubMed:21577210, ECO:0000269|PubMed:22128911 151..264 33/113 (29%)
C2H2 Zn finger 156..176 CDD:275368 3/19 (16%)
C2H2 Zn finger 182..202 CDD:275368 7/19 (37%)
zf-H2C2_2 195..218 CDD:404364 6/23 (26%)
zf-C2H2 208..230 CDD:395048 7/21 (33%)
C2H2 Zn finger 210..230 CDD:275368 6/19 (32%)
C2H2 Zn finger 238..255 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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