DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12391 and CG4730

DIOPT Version :10

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster


Alignment Length:396 Identity:83/396 - (20%)
Similarity:153/396 - (38%) Gaps:88/396 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 ADVPIRERKKEEPVDEDQ--------CRVCTSKE------ELVCLFKKQIDATPADMLLVICPNV 273
            |:.|::....|..:.:..        ||:|..:.      ::..::.::...:..| ...||...
  Fly    21 AEAPVKLVSHEVSLSDSTTSLELSNCCRLCLEEPYPNQMLDMTVIYDQEAALSYYD-CYEICTKE 84

  Fly   274 SIL--PKDFMPQFICTKCMGSLTIAIQLRKQLETTDQELRKRLSRSKNKVRRPRGYVVIDAPVTD 336
            .:.  ||: .|:.:|.:|...|..|....|::...:|:||:.             :|..:|    
  Fly    85 DLRQNPKN-EPRTLCKRCAVELKWAYDFHKKMAIANQQLREI-------------FVATEA---- 131

  Fly   337 SSEDEDELDDEFKVSDVAGTTSADSDSADSDDSEKEKKKP-------GPRGRPRKKPLKRGTDSD 394
            ::|.||:::||...:|:       ::....::.|::::.|       .||.|...|...:....:
  Fly   132 NTEQEDDVEDEENEADM-------NEEFLMEEIEEKQETPIDSLEDIVPRNRHTGKSNCKFCHKE 189

  Fly   395 GEPSSAQKKKYQPSSTASVGPFECPNCDLTFSRKQSYVLH-RKTHERIEHACPICGKKFKVEWAY 458
            .. :.::..|:|....|:...|.|..||..:..||:..:| ...|.:....|..|||.|.:..|.
  Fly   190 FR-NHSRMAKHQMIHLANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCGKVFAIAKAL 253

  Fly   459 KTHMQRHEQERAHFRCELCPKIFRLRAELKHHMAQRHDEHGFIYECKRCQRTFLTQQRLQRHQAV 523
            :.|.:.|.:: ..:.|:||.:.|..|:.|..|...:|....||.|...||::|.:...|:.|:..
  Fly   254 EIHKRYHNRD-FPYSCDLCDRRFAQRSHLTVHQQVKHSGSRFICEFPGCQKSFTSSSSLRNHECT 317

  Fly   524 ------GCQR-HKEDSVRIK------------------EEQSRFKQESRSK----------DDRH 553
                  .|.. |:....|.|                  ||..:| ...|||          .:.|
  Fly   318 HTAMPFECAHCHQSYPARNKLRMHLERKHNMVVQMEDLEEMRKF-HIVRSKLVMAKIYSDQKESH 381

  Fly   554 HGNNSS 559
            |..|.|
  Fly   382 HAKNDS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 2A1904 <9..240 CDD:273344 3/16 (19%)
zf-AD 240..312 CDD:214871 16/87 (18%)
PRK05580 <416..>449 CDD:455857 9/33 (27%)
C2H2 Zn finger 418..438 CDD:275368 6/20 (30%)
zf-C2H2 443..465 CDD:395048 7/21 (33%)
C2H2 Zn finger 445..465 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..491 CDD:275368 6/16 (38%)
C2H2 Zn finger 504..521 CDD:275368 4/16 (25%)
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 16/79 (20%)
C2H2 Zn finger 183..203 CDD:275368 2/20 (10%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..289 CDD:275368 7/20 (35%)
C2H2 Zn finger 296..318 CDD:275368 6/21 (29%)
C2H2 Zn finger 325..346 CDD:275368 4/20 (20%)

Return to query results.
Submit another query.