DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12391 and hb

DIOPT Version :10

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster


Alignment Length:309 Identity:65/309 - (21%)
Similarity:106/309 - (34%) Gaps:93/309 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 DEDEDPNEEVEEIEPDFETGTDAEGELITGDEPGDLAD-VPIRERKKEEPVDEDQCRVCTSKEEL 250
            ::.:..|||.|:         |.|.|..:.|...||:. .|::|       ||.|.:   .::.|
  Fly   518 NQQQSDNEEEEQ---------DDEYERKSVDSAMDLSQGTPVKE-------DEQQQQ---PQQPL 563

  Fly   251 VCLFKKQIDATPADMLLVICPNVS-----ILPKDFMPQFICTKCMGSLTIAIQLRKQLETTDQEL 310
            ....|.:.:|||    |:...|.|     :|..|.:               :|||.:..|:.::|
  Fly   564 AMNLKVEEEATP----LMSSSNASRRKGRVLKLDTL---------------LQLRSEAMTSPEQL 609

  Fly   311 RKRLSRSKNKVRRPRGYVVIDAPVTDSS--------------EDEDELDDEFKVSDV-AGTTSAD 360
            :                 |...|:..:|              ......|:..:.:.| ...|||.
  Fly   610 K-----------------VPSTPMPTASSPIAGRKPMPEEHCSGTSSADESMETAHVPQANTSAS 657

  Fly   361 SDSADSDDSEKEKKKPGPRGRPRKKPLKRGTDS--DGEPSSAQKKKYQPSSTASVGPFECPNCDL 423
            |.::.|.:|.....  ...|.........||.|  ...||..      |::..::  :||..||:
  Fly   658 STASSSGNSSNASS--NSNGNSSSNSSSNGTTSAVAAPPSGT------PAAAGAI--YECKYCDI 712

  Fly   424 TFSRKQSYVLHRKTHERIE-HACPICGKKFKVEWAYKTHMQRHEQERAH 471
            .|.....|.:|...|...: ..|.:||:|.........||.|:    ||
  Fly   713 FFKDAVLYTIHMGYHSCDDVFKCNMCGEKCDGPVGLFVHMARN----AH 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 2A1904 <9..240 CDD:273344 14/53 (26%)
zf-AD 240..312 CDD:214871 16/76 (21%)
PRK05580 <416..>449 CDD:455857 9/33 (27%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-C2H2 443..465 CDD:395048 6/21 (29%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..491 CDD:275368
C2H2 Zn finger 504..521 CDD:275368
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368
C2H2 Zn finger 271..291 CDD:275368
zf-H2C2_2 283..308 CDD:463886
C2H2 Zn finger 299..319 CDD:275368
C2H2 Zn finger 327..345 CDD:275368
C2H2 Zn finger 707..727 CDD:275371 6/19 (32%)
C2H2 Zn finger 735..757 CDD:275371 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.