DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12391 and Ovol3

DIOPT Version :10

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001276749.1 Gene:Ovol3 / 365226 RGDID:1583800 Length:190 Species:Rattus norvegicus


Alignment Length:143 Identity:38/143 - (26%)
Similarity:57/143 - (39%) Gaps:18/143 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 SSAQKKKYQPSSTASV-------GPFECPNCDLTFSRKQSYVLHRKTHERI-EHACPICGKKFKV 454
            ||..:..:..||..::       |...||.|...|..::....|.|.|... .|.|..|||.|..
  Rat    44 SSGLRDTWAASSQGTLTSVPKGPGTLSCPLCPKAFPLQRMLTRHLKCHSPARRHVCHYCGKGFHD 108

  Fly   455 EWAYKTHMQRHEQERAHFRCELCPKIFRLRAELKHHMAQRH---------DEHGFIYECKRCQRT 510
            .:..|.||:.|...|. |||..|.|.|..|..|:.|:|:.|         :....::.|:.|..|
  Rat   109 AFDLKRHMRTHTGIRP-FRCGACGKAFTQRCSLEAHLAKVHGQPASYAYRERREKLHVCEDCGFT 172

  Fly   511 FLTQQRLQRHQAV 523
            ....:...:|:.:
  Rat   173 SSRPEAYAQHRTL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 2A1904 <9..240 CDD:273344
zf-AD 240..312 CDD:214871
PRK05580 <416..>449 CDD:455857 9/33 (27%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-C2H2 443..465 CDD:395048 9/21 (43%)
C2H2 Zn finger 445..465 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..491 CDD:275368 6/16 (38%)
C2H2 Zn finger 504..521 CDD:275368 3/16 (19%)
Ovol3NP_001276749.1 COG5048 <19..>127 CDD:227381 24/83 (29%)
C2H2 Zn finger 71..91 CDD:275368 6/19 (32%)
zf-C2H2 97..119 CDD:395048 9/21 (43%)
C2H2 Zn finger 99..119 CDD:275368 8/19 (42%)
zf-H2C2_2 111..136 CDD:463886 11/25 (44%)
C2H2 Zn finger 127..148 CDD:275368 8/20 (40%)
C2H2 Zn finger 166..186 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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