DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12391 and Zfp110

DIOPT Version :9

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_006228173.1 Gene:Zfp110 / 308362 RGDID:1306339 Length:865 Species:Rattus norvegicus


Alignment Length:541 Identity:106/541 - (19%)
Similarity:183/541 - (33%) Gaps:106/541 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PLAETNGEQRQNPQESAQNQEQPQPRQDLAGKSVGSADDGVSGTVGQIM--DYLEDDAGATADQD 69
            |..|.......:|....:....|.|: ||       :.:|:..||.:|:  |.:::.....::|.
  Rat   364 PTLENRAISPDSPIPVVKPIHDPNPK-DL-------SRNGIQSTVFEIISQDRVQEIHTIESNQA 420

  Fly    70 AEMGEAEYLDGEMPQEDESETPQTEKANEGCQESSNKKDLQESAAKDDFS-KEKSGEDGE--KDT 131
            ..:.|..:     ||:..||   :.|:.||.....::..|.|...:.... |:|....|:  |:|
  Rat   421 GLLQEKSH-----PQKKLSE---SSKSQEGTNLHKSQGSLDEVPPRKHVKVKQKGTRKGKDRKNT 477

  Fly   132 DKEKKATHLHEDNNDDAEKDGDEADAEDEDDVEKPEDEDGTEEGDEAIEEDEDALDEDEDPNEEV 196
            ....:...:.....|..|..| ..|:.........:::.|:|:|......|...|          
  Rat   478 ISMTRGLRIRNQQKDSVEWQG-RGDSNPMTHGYSIKNQRGSEQGTAGARRDPITL---------- 531

  Fly   197 EEIEPDFETGTDAEGELITGDEPGDLAD-----VPIRERKKEEPVDEDQCRVCTSKEELVCLFKK 256
             .:...|.       :..||.|.|...|     ||....|..:...|.. :|..|...:..:...
  Rat   532 -TVSAQFY-------QKATGSEEGRFRDNSNAIVPDTPTKIHQKSPEWH-KVGRSNNSMSSVQND 587

  Fly   257 QIDATPA----DMLLVICPNVSILPKDFMPQFICTKCMGSLTIAIQLRKQLETTDQELRKRLSRS 317
            |:.:...    :.:|.....|.|..|.:..    .|..|:......::...:.:..|..:.||.|
  Rat   588 QMGSGAGRGRDNTILTHALPVKIHQKGYEE----GKVQGNRNSLRHVKAHQKGSKGERVRELSTS 648

  Fly   318 KNKVRRPRGYVVIDAPVTDSSEDEDELDDEFKVSDVAGTTSADSDSADSDDSEKEKKKPGP---- 378
            :..|...:.::                           .||......:::||.|.    ||    
  Rat   649 EKHVPYIKNHL---------------------------KTSEREKGRENNDSIKY----GPYIKT 682

  Fly   379 --RGRPRKKPLKRGTDSDGEPSSAQK----KKYQPSSTASVGPFECPNCDLTFSRKQSYVLHRKT 437
              ||...:|..:....:......||:    |.::.|...     .|..|...|...:.:.:|:|.
  Rat   683 CYRGSEVRKLRRANNCTKAISRHAQQIFFIKIHKGSQVC-----RCSECGKMFRNSRYFSVHKKI 742

  Fly   438 H--ERIEHACPICGKKFKVEWAYKTHMQRHEQERAHFRCELCPKIFRLRAELKHHMAQRHDEHGF 500
            |  || .:.|..|||.|....:...|::.|..||. |.|..|.:.|..|:.:..|:  |......
  Rat   743 HTGER-PYMCMACGKAFVQSSSLTQHLRIHSGERP-FECSECGRTFNDRSAISQHL--RTHTGAK 803

  Fly   501 IYECKRCQRTFLTQQRLQRHQ 521
            .|.|:.|.:.|.....|.||:
  Rat   804 PYHCQHCGKAFRQSSHLTRHE 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 zf-AD 240..313 CDD:285071 10/76 (13%)
zf-C2H2 416..438 CDD:278523 5/21 (24%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
zf-C2H2 443..465 CDD:278523 6/21 (29%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..491 CDD:275368 4/16 (25%)
C2H2 Zn finger 504..521 CDD:275368 5/16 (31%)
Zfp110XP_006228173.1 KRAB 57..116 CDD:214630
KRAB 57..96 CDD:279668
SCAN 200..328 CDD:128708
SCAN 200..283 CDD:280241
KRAB 321..>361 CDD:214630
KRAB 321..360 CDD:279668
C2H2 Zn finger 696..715 CDD:275370 3/18 (17%)
C2H2 Zn finger 723..743 CDD:275368 5/19 (26%)
zf-H2C2_2 735..760 CDD:290200 10/25 (40%)
COG5048 747..>804 CDD:227381 17/60 (28%)
C2H2 Zn finger 751..771 CDD:275368 6/19 (32%)
zf-H2C2_2 763..787 CDD:290200 7/24 (29%)
zf-C2H2 777..799 CDD:278523 7/23 (30%)
C2H2 Zn finger 779..799 CDD:275368 6/21 (29%)
zf-C2H2 805..827 CDD:278523 7/20 (35%)
C2H2 Zn finger 807..827 CDD:275368 6/18 (33%)
zf-H2C2_2 819..844 CDD:290200 3/6 (50%)
C2H2 Zn finger 835..855 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350877
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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