DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12391 and Zfp18

DIOPT Version :9

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001012008.1 Gene:Zfp18 / 303226 RGDID:1305130 Length:556 Species:Rattus norvegicus


Alignment Length:588 Identity:121/588 - (20%)
Similarity:197/588 - (33%) Gaps:146/588 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AEMGEAEYLDGEMPQEDESETPQTEK---------ANEGCQES----------------SNKKDL 109
            |:..:|.:...::.|:.|...|:|.:         ...|.||:                ..|:.:
  Rat    16 AKAEDATFSGSDVIQQRELANPETARQLFRQFRYQVMSGPQETLRQLRKLCFQWLRPEVHTKEQI 80

  Fly   110 QESAAKDDFSKEKSGE-----------DGEKDTDKEKKATHLHEDNNDDAEK---------DGDE 154
            .|....:.|.....||           .||       :|..|.|....|.:|         .|.|
  Rat    81 LEILMLEQFLTILPGEIQMWVRKQCPGSGE-------EAVTLVESLKGDPQKLWQWISIQVLGQE 138

  Fly   155 ADAEDEDDVEKPEDEDGTEEGDEAIEEDEDALDEDEDPNEEVEEIEPDFETGTDAEGELITG--D 217
            ...|.|:....        .||:.    |.||  :.:|..||...:...:..:.|.|||::.  .
  Rat   139 IPFEKENSARC--------RGDKV----EPAL--EAEPTVEVVPQDLPLQNTSSAPGELLSHGVK 189

  Fly   218 EPGD------LADVPIRERKKEEP-------------VDEDQCR--VCTSKEE----LVCLFKKQ 257
            |..|      ||...:..|.:|.|             :.|:|.|  ..|.||:    ::..:.|.
  Rat   190 EESDLEPELALAASQLPARPEERPTRDQEVGTALLPSLQEEQWRHLDSTQKEQYWDLMLETYGKM 254

  Fly   258 IDATPADMLLVICPNVSILPKDF--MPQFICTKCMGSLTIAIQL---RKQLETTDQELRKRLSRS 317
            :...         ..:|....|.  |.::      |...:.:.|   .|......:|.|:...:.
  Rat   255 VSGV---------AGISNSKPDLTNMAEY------GEELVGLHLHSAEKMARAPCKEDRQENDKE 304

  Fly   318 KNKVRRPRGYVVIDAPVTDSSEDEDELDDEFKVSDVAGTTSADSDSADSDDSEKEKKK------- 375
            ...:...|....:|  |.|.:  ..|...:..:||..|.:.......:|.....|..:       
  Rat   305 NLNLENHRDQGCLD--VFDQA--PGEAPPQTALSDFFGESEPHHFGGESVPEALENLQGEGTGAH 365

  Fly   376 --PGPRGRPRKKPLKRGTDSDGEPSS--AQKKKYQPSSTASVGPF-----ECPNCDLTFSRKQSY 431
              |..||..::......:.|.||.|:  .::|:.......:..|.     .|..|..||.|....
  Rat   366 LFPHERGSGKQLGQHIQSSSSGELSALWLEEKREASQKGQARAPMAQKLPTCRECGKTFYRNSQL 430

  Fly   432 VLHRKTH--ERIEHACPICGKKFKVEWAYKTHMQRHEQERAHFRCELCPKIFRLRAELKHHMAQR 494
            |.|::||  |...| |.||.|.|.....:..|.:.|..|:. .:|:.|.|.|...:.|:||....
  Rat   431 VFHQRTHTGETYFH-CRICKKAFLRSSDFVKHQRTHTGEKP-CKCDYCGKGFSDFSGLRHHEKIH 493

  Fly   495 HDEHGFIYECKRCQRTFLTQQRLQRHQAVGCQRHK-EDSVRIKEEQSRFKQESRSKDDRHHGNNS 558
            ..|..  |:|..|:::|:.:....|||.|    |. |...:......||...|..  |:|..::.
  Rat   494 TGEKP--YKCPICEKSFIQRSNFNRHQRV----HTGEKPYKCTHCGKRFSWSSSL--DKHQRSHL 550

  Fly   559 SKR 561
            .|:
  Rat   551 GKK 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 zf-AD 240..313 CDD:285071 14/83 (17%)
zf-C2H2 416..438 CDD:278523 7/26 (27%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
zf-C2H2 443..465 CDD:278523 7/21 (33%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..491 CDD:275368 6/16 (38%)
C2H2 Zn finger 504..521 CDD:275368 4/16 (25%)
Zfp18NP_001012008.1 SCAN 37..144 CDD:128708 20/113 (18%)
SCAN 37..125 CDD:280241 16/94 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..195 6/25 (24%)
KRAB_A-box 226..256 CDD:143639 7/29 (24%)
C2H2 Zn finger 417..437 CDD:275368 7/19 (37%)
COG5048 <428..521 CDD:227381 30/100 (30%)
zf-H2C2_2 433..454 CDD:290200 10/21 (48%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
zf-H2C2_2 457..481 CDD:290200 6/24 (25%)
C2H2 Zn finger 473..493 CDD:275368 7/19 (37%)
zf-H2C2_2 486..510 CDD:290200 8/25 (32%)
COG5048 497..>549 CDD:227381 15/59 (25%)
C2H2 Zn finger 501..521 CDD:275368 7/23 (30%)
zf-H2C2_2 513..537 CDD:290200 7/27 (26%)
zf-C2H2 527..549 CDD:278523 5/23 (22%)
C2H2 Zn finger 529..549 CDD:275368 5/21 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350835
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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