DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12391 and Zscan5b

DIOPT Version :10

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_218239.6 Gene:Zscan5b / 292566 RGDID:1559143 Length:484 Species:Rattus norvegicus


Alignment Length:489 Identity:97/489 - (19%)
Similarity:163/489 - (33%) Gaps:155/489 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 DLQESAAKDDFSKEKSGEDGEKDTDKEKK---------ATHLHEDNNDDAEKDGDE-ADAED-ED 161
            :||..|.::...:.|..|:......|.:|         |..|.:.:.::||...|| .|.:| ..
  Rat    92 ELQALAKENRVRRCKDLEEMMLKARKHQKWSIIYSQGQAYLLRDSSVEEAEASPDEWGDCKDLFQ 156

  Fly   162 DVEKPEDEDGTEEGDEAIEEDEDALDEDEDPNEEVEE---------------IEPDFETGTDAEG 211
            :.:..|.::....| :||.|.::..:|.|:|:...||               :.|:...|   .|
  Rat   157 EHQSNESKESLYRG-QAIPELQNLSEETEEPSTSQEENILLGLIPGRVQQDYLRPEHSLG---NG 217

  Fly   212 ELITGDEPGDLADVPIRERKKEEPVDEDQCRVCTSKEELVCLFKKQIDATPADMLLVICPNVSIL 276
            .:...:|.|  |.||:.:                             |..|..     .|.:|:.
  Rat   218 SVPDWEEAG--ASVPVGQ-----------------------------DPHPTQ-----GPALSLR 246

  Fly   277 PKDFM-PQFICTKCMGSLTIAIQLRKQLETTDQELRKRLSRSKNKVRRPRGYVVIDAPVTDSSED 340
            .|..| ||....  :|::..:..:|::....:::|:.  .||......|....|  |..|.::||
  Rat   247 EKGAMQPQEYTV--VGAVPSSTHIRERYLALNRDLQS--LRSFGGFNLPTSQGV--ASYTGNAED 305

  Fly   341 EDELDDEFKVSDVAGTTSADSDSADSDDSEKEKKKPGPRGRPRKKPLKRGTDSDGEPSSAQKKKY 405
            .                                             ||........|...:    
  Rat   306 R---------------------------------------------LKTANPETAHPQPVE---- 321

  Fly   406 QPSSTASVGPFECPNCDLTFSRKQSYVLHRKTH--ERIEHACPICGKKFKVEWAYKTHMQRHEQE 468
            |.::.|....|:||.|..:|..|..:.||.::|  || ...|.:|.|.|......:.|.:.|..|
  Rat   322 QVNTLAGQAQFQCPQCKKSFLYKSHFTLHWRSHTGER-PFKCNLCNKAFLQPSDLRVHRRVHTGE 385

  Fly   469 RAHFRCELCPKIFRLRAELKHHMAQRHDEHGFI--------------------------YECKRC 507
            :. :.||:|.|.|...:.|:.|......|..::                          |.||:|
  Rat   386 KP-YSCEVCGKEFAHGSTLQGHSRVHTKEKPYVCENCGQCFSHKGNLTVHFRIHCGLRPYICKKC 449

  Fly   508 QRTFLTQQRLQRHQAVGCQRHKEDSVRIKEEQSR 541
            .:.|..|...:||.....::.|   .|.:||.||
  Rat   450 NKAFRQQGTWKRHMKTHWKKRK---ARAREEPSR 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 2A1904 <9..240 CDD:273344 33/157 (21%)
zf-AD 240..312 CDD:214871 11/72 (15%)
PRK05580 <416..>449 CDD:455857 12/34 (35%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
zf-C2H2 443..465 CDD:395048 5/21 (24%)
C2H2 Zn finger 445..465 CDD:275368 5/19 (26%)
C2H2 Zn finger 474..491 CDD:275368 6/16 (38%)
C2H2 Zn finger 504..521 CDD:275368 6/16 (38%)
Zscan5bXP_218239.6 SCAN 33..112 CDD:153421 5/19 (26%)
COG5048 <261..>432 CDD:227381 41/225 (18%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
SFP1 <356..411 CDD:227516 16/56 (29%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
zf-H2C2_2 374..399 CDD:463886 8/25 (32%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
zf-C2H2 416..438 CDD:395048 0/21 (0%)
C2H2 Zn finger 418..438 CDD:275368 0/19 (0%)
zf-C2H2 444..466 CDD:395048 8/21 (38%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)

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