DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12391 and Zscan18

DIOPT Version :9

Sequence 1:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_011248809.1 Gene:Zscan18 / 232875 MGIID:3643810 Length:864 Species:Mus musculus


Alignment Length:689 Identity:117/689 - (16%)
Similarity:236/689 - (34%) Gaps:187/689 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PLAETNGEQRQNPQ--ESAQNQEQPQPRQDLAGKSVGSADDG--VSGTVGQIMDYLEDDAGATAD 67
            |:.:....|:..|.  |....|::|..:::|..::.....|.  ....:.|..:.::.||....:
Mouse   173 PMQQEEPMQQDEPSQWEEPMQQDEPMQQEELMQQTEPIEQDKPIQQEELTQQEEPIQQDASIQRE 237

  Fly    68 --------------------QDAEMGEAEYLDGEMPQEDESETPQTEKANEGCQESSNKKDLQES 112
                                ||....:.|::..|.|.:....:.|.|.:.:  :|||.:   :||
Mouse   238 LIHQVRPIQKELILREEFIQQDKCTQKEEFIQQEKPIQQVRFSEQEEPSQQ--EESSQQ---EES 297

  Fly   113 AAKDDFSKEKSGEDGEKDTDKEKKATHLHEDNNDDAEKDGDEADAEDEDDVEKPEDEDGTEEGDE 177
            :.:::.|::|......:...:|:.:     ...:.::|| ..:..|:....::|..:|...:.:|
Mouse   298 SQQEELSQQKESSQKAQPYQQEEPS-----QQQEPSQKD-QPSQQEEPSQQQEPSQKDQPSQQEE 356

  Fly   178 AIEEDE----DALDEDEDPNEEVEEIEPDFETGTDAEGELITGDEPGDLADVPIRERKKEEPVDE 238
            ..:::|    |..::.|:|:::.   ||..:...:.:.||...:||......    .::|||..:
Mouse   357 LSQQEEPSQKDQCNQQEEPSQQQ---EPSQKDQPNQQAELSQQEEPSQKDQC----NQQEEPSQK 414

  Fly   239 DQCRVCTSKEELVCLFKKQIDATPADMLLVICPNVSILPKDF--------------------MPQ 283
            |||             |:|.:.:..|.     ||....|...                    ..:
Mouse   415 DQC-------------KQQEEPSQKDQ-----PNQQEEPSQLKETETITERSAADLEFSRLRFRE 461

  Fly   284 FICTKCMGSLTIAIQLRKQLETTDQELRKRLSRSKNKV--------------RRPRGYVVIDAP- 333
            |:..:..|......:|.   |...|.||.. :.||.::              .|.|.:||...| 
Mouse   462 FVYQEAAGPHQTLARLH---ELCRQWLRPE-ACSKEQILELLVLEQFLGILPDRVRPWVVAQYPE 522

  Fly   334 -----------VTDSSEDEDELDDEFKVSDVAGTTSADSDSADSDDSEKEKK---------KPGP 378
                       ::|..|:...:     :....|::|:.|:.    |.|:..:         .|..
Mouse   523 NCKKAASLVEGISDILEEPGMM-----LCSPGGSSSSFSEG----DYERCPEPLLLPCGLLSPNR 578

  Fly   379 RGRPRKKPLKRGTDS-------------DGEPSSAQKKKYQPSSTASV-GPF--ECPNCDLTFSR 427
            ..|||...::|.|..             |.|.:..:|.|...::||.: ||.  |..:.|.|...
Mouse   579 NLRPRDILVRRDTSPLLPAWPTLESVHLDQERTEGEKSKEANAATAELKGPLQSEWDHLDPTEDN 643

  Fly   428 KQSYVLHRKTHERIEHACPICGKKFKVEWAYKTHMQRHEQERAHFRCELCPKIFRLRAELKHHMA 492
            ..||      .:.:...|       :...|..|.|...|:..|         :..|.........
Mouse   644 LTSY------SKLLLWGC-------QFSQAGPTSMLETEEPCA---------VENLPGGSLPDST 686

  Fly   493 QRHDEHGFIYECKRCQRTFL----------------TQQRLQRHQAVGCQRHKEDSVRIKEEQSR 541
            ::.:..|.:.|......|.:                .::..|..:|:..: .::.|....:.||.
Mouse   687 RQQESKGNVCEEVSLGETLMESLSGDVPVSASIDTALEEEQQPQKALDAE-GEDSSPASPQRQSV 750

  Fly   542 FKQESRSKDDRHHGNNSSKRRPGEGRDLFKAVAPPTTTY 580
            .:|.::.||..|.|..:.:..|.:..::.......|::|
Mouse   751 IQQSAQDKDRPHQGTGTKRPHPDDEDEMAPECLSSTSSY 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12391NP_610639.1 zf-AD 240..313 CDD:285071 15/92 (16%)
zf-C2H2 416..438 CDD:278523 5/23 (22%)
C2H2 Zn finger 418..438 CDD:275368 4/19 (21%)
zf-C2H2 443..465 CDD:278523 4/21 (19%)
C2H2 Zn finger 445..465 CDD:275368 4/19 (21%)
C2H2 Zn finger 474..491 CDD:275368 1/16 (6%)
C2H2 Zn finger 504..521 CDD:275368 2/32 (6%)
Zscan18XP_011248809.1 PAT1 <55..>208 CDD:370676 7/34 (21%)
SCAN 453..540 CDD:366881 15/90 (17%)
C2H2 Zn finger 833..853 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847332
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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