DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG13229 and gper1

DIOPT Version :9

Sequence 1:	NP_001260880.1	Gene:	CG13229 / 36168	FlyBaseID:	FBgn0033579	Length:	414	Species:	Drosophila melanogaster
Sequence 2:	NP_001122195.1	Gene:	gper1 / 565271	ZFINID:	ZDB-GENE-090311-1	Length:	353	Species:	Danio rerio

Alignment Length:	420	Identity:	84/420 - (20%)
Similarity:	156/420 - (37%)	Gaps:	119/420 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 MQETGNQMGQTHMHQRVPFNDTVLKDYHLT----STDIEKFVKLWQEYQMKNMTPQVDECQGYCQ 62
            |:|....:.|.:::....||.:.  |:::|    |||..:|                     |..
Zfish     1 MEEQTTNVIQIYVNGTEQFNASF--DFNITDVKESTDTYEF---------------------YII 42

  Fly    63 GEIYNWLRAYNSIHGYVSLMICIF----GTIANILNIMV-LTRKEMAKTP----INNILKWLAVA 118
            |.             ::|.:..||    |.|.|||.::| |..:|....|    :|     ||||
Zfish    43 GL-------------FLSCLYTIFLFPIGFIGNILILVVNLNHRERMTIPDLYFVN-----LAVA 89

  Fly   119 DMFV----MLEYIPYTSYQYIYMGPGEKDLSYTWAVCLLVHMHFTQILHTISIGLTVTLAVWRYV 179
            |:.:    ::|........|.|.           .:|..:.: |.|:....||.....::..|||
Zfish    90 DLILVADSLIEVFNLNEKYYDYA-----------VLCTFMSL-FLQVNMYSSIFFLTWMSFDRYV 142

  Fly   180 AIRHPNGGCANFLLAHSREAILLPFILSPILCLPTYFVFQVRETYDVDKVNSEAMYHVYFDKDSV 244
            |:...........:.|::.:..|.::.|.:..|..:.:.|.:.|.:|         |..|   :.
Zfish   143 ALTSSMSSSPLRTMQHAKLSCSLIWMASILATLLPFTIVQTQHTGEV---------HFCF---AN 195

  Fly   245 LYRFNFWIHSVLIKLLPCGILIVISAVLMHVLCEASRRRLKLRDYNNPAKYAIQLNLNETKSKKP 309
            ::... |:...:..|:|..|:.:..::::..|..|.:.                      |...|
Zfish   196 VFEIQ-WLEVTIGFLIPFSIIGLCYSLIVRTLMRAQKH----------------------KGLWP 237

  Fly   310 PRCDRRNDRTTLLLVAVLVLFLITEFPQGL---LGLLSGVME-----KCFFAHCYPPFGELMDLL 366
                 |..:...::|.|:::|.|...|:.:   :.||.|..:     .....|.||..|.:::|.
Zfish   238 -----RRQKALRMIVVVVLVFFICWLPENVFISIQLLQGTADPSKRTDTTLWHDYPLTGHIVNLA 297

  Fly   367 ALINAAVGFVLYGLMSKQFRTTFRSLFMKR 396
            |..|:.:..::|..:.:.||...| ||:||
Zfish   298 AFSNSCLNPIIYSFLGETFRDKLR-LFIKR 326

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG13229	NP_001260880.1	7tm_4	78..393	CDD:304433	67/335 (20%)
gper1	NP_001122195.1	7tm_1	61..309	CDD:278431	58/304 (19%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	0	0.000