DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13229 and Gpr139

DIOPT Version :9

Sequence 1:NP_001260880.1 Gene:CG13229 / 36168 FlyBaseID:FBgn0033579 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001019412.1 Gene:Gpr139 / 293545 RGDID:1311729 Length:345 Species:Rattus norvegicus


Alignment Length:365 Identity:88/365 - (24%)
Similarity:160/365 - (43%) Gaps:89/365 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 YVSLMICIFGTIANILNIMVLTR--KEMAKTPINNILKWLAVADMFVM--LEYIPYTSYQYI--- 135
            |.|.::|: |..||||.:::|::  ....|:..|.:|. ||.||:.|:  :.::.:....:|   
  Rat    24 YYSFLLCL-GLPANILTVIILSQLVARRQKSSYNYLLA-LAAADILVLFFIVFVDFLLEDFILTM 86

  Fly   136 YMGP-GEKDLSYTWAVCLLVHMHFTQILHTISIGLTVTLAVWRYVAIRHPNGGCANFLLAHSREA 199
            .|.| .:|         ::..:.|:.| || ||.:||.|.|.||:|:.||.........|.:|:.
  Rat    87 QMPPIPDK---------IIEVLEFSSI-HT-SIWITVPLTVDRYIAVCHPLKYHTVSYPARTRKV 140

  Fly   200 ILLPFILSPILCLPTYFVFQV-RETYDVDKVNSEAMYHVYFDKDSVLYRFNFWIHSVLIKLLPCG 263
            ||..:|...:..:|.|:...: .|.|     .|.:|:||.           .|||...:.|:||.
  Rat   141 ILSVYITCFLTSIPYYWWPNIWTEDY-----ISTSMHHVL-----------VWIHCFTVYLVPCS 189

  Fly   264 ILIVISAVLMHVLCEASRRR--LKLRDYNNPAKYAIQLNLNETKSKKPPRCDRRNDRTTLLLVAV 326
            |..::::::::.|    ||:  .:||.|:                         ..:||.:|..:
  Rat   190 IFFILNSIIVYKL----RRKSNFRLRGYS-------------------------TGKTTAILFTI 225

  Fly   327 LVLFLITEFPQGLL---GLLSGVMEKCFFAHCYPPFGELMDLLALINAAVGFVLYGLMSKQFRT- 387
            ..:|.....|:.::   .|....::..:..|.   ..::.::|||:|.|:.|.||..:||:||| 
  Rat   226 TSIFATLWAPRIIMILYHLYGAPIQNPWLVHI---MLDVANMLALLNTAINFFLYCFISKRFRTM 287

  Fly   388 ---TFRSLF----------MKRHFGSTEMTRLTRVTTTCV 414
               |.::||          ...:|..|....::...:.|:
  Rat   288 AAATLKALFKCQKQPVQFYTNHNFSITSSPWISPANSHCI 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13229NP_001260880.1 7tm_4 78..393 CDD:304433 83/332 (25%)
Gpr139NP_001019412.1 7tmA_GPR139 19..288 CDD:320585 82/324 (25%)
TM helix 1 21..45 CDD:320585 9/21 (43%)
TM helix 2 55..77 CDD:320585 7/22 (32%)
TM helix 3 94..116 CDD:320585 10/32 (31%)
TM helix 4 139..155 CDD:320585 3/15 (20%)
TM helix 5 173..196 CDD:320585 9/33 (27%)
TM helix 6 219..241 CDD:320585 4/21 (19%)
TM helix 7 256..281 CDD:320585 9/27 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D343117at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X861
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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