DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13229 and dmsr-11

DIOPT Version :9

Sequence 1:NP_001260880.1 Gene:CG13229 / 36168 FlyBaseID:FBgn0033579 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_504725.2 Gene:dmsr-11 / 191158 WormBaseID:WBGene00022605 Length:355 Species:Caenorhabditis elegans


Alignment Length:354 Identity:86/354 - (24%)
Similarity:150/354 - (42%) Gaps:80/354 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LRAYNSIHGYVSLMICIFGTIANILNIMVLTRKEMAKTPINNILKWLAVADMFVMLEYIP----- 128
            ::||...|.||...|.||...||||.:::||||||..:.:|..:..:||.|:...:..:.     
 Worm    35 VKAYRPFHYYVLTFIVIFAFFANILILILLTRKEMRYSGVNVTMMLIAVCDLGCAIAGLSQLYLR 99

  Fly   129 -----YTSYQYIYMGPGEKDLSYTWAVCLLVHMHFTQI-LHTISIGLTVTLAVWRYVAIRHPNGG 187
                 |:|||..|               ....:::.|| .|..|:.|.|.:|..|.:.:..    
 Worm   100 NFSDNYSSYQTAY---------------AQFIVYYCQIAFHAESLYLAVGMAFCRVITLSS---- 145

  Fly   188 CANFLLAHSREAILLP---FILSPILCLPTY-------FVFQVRETYDVDKVNSEAMYHVYFD-- 240
                 .:.||:....|   ..::.:||.|.:       |:..|:|.|        |...|:.|  
 Worm   146 -----ASDSRDTWQSPKYAIRVAVLLCFPVFAVSSFVLFLNSVKEVY--------ADGSVFLDIS 197

  Fly   241 -----KDSVLYRFNFWIHSVLIKLLPCGILIVISAVLMHVLCEASRRRLKLRDYNNPAKYAIQLN 300
                 .|.:..:.:.:......|:|| .||:.:.::::.:..:|.::|            :..|:
 Worm   198 PLSLANDCLFLKTSIFFSGSCFKILP-SILMSMFSIIILIRIKAGKQR------------SNSLS 249

  Fly   301 LNETKSKKPPRCDRRNDRTTLLLVAVLVLFLITEFPQGLLGLLSGVMEKCFFAHCYPPFGELMDL 365
            .|:|..      |.:.||:|..:..|:|:|:|||.|||...:|..:....:..: |......|::
 Worm   250 HNQTDQ------DAQIDRSTRFIQVVVVVFVITETPQGFFSVLGSISINDYINY-YQHLSIFMNI 307

  Fly   366 LALINAAVGFVLYGLMSKQFRTTFRSLFM 394
            ||..|....|::|..:|.:||..|..||:
 Worm   308 LAFFNTTTSFIIYSTLSSKFRKLFAQLFV 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13229NP_001260880.1 7tm_4 78..393 CDD:304433 81/342 (24%)
dmsr-11NP_504725.2 7tmA_FMRFamide_R-like 40..331 CDD:320109 81/342 (24%)
TM helix 1 42..66 CDD:320109 11/23 (48%)
TM helix 2 75..96 CDD:320109 4/20 (20%)
TM helix 3 115..137 CDD:320109 6/21 (29%)
TM helix 4 161..177 CDD:320109 3/15 (20%)
TM helix 5 209..232 CDD:320109 5/23 (22%)
TM helix 6 260..285 CDD:320109 12/24 (50%)
TM helix 7 299..324 CDD:320109 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BWNV
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D343117at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

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