DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13229 and srw-31

DIOPT Version :10

Sequence 1:NP_610637.1 Gene:CG13229 / 36168 FlyBaseID:FBgn0033579 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_507435.2 Gene:srw-31 / 186943 WormBaseID:WBGene00005778 Length:367 Species:Caenorhabditis elegans


Alignment Length:407 Identity:88/407 - (21%)
Similarity:165/407 - (40%) Gaps:93/407 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 FVKLWQEYQMKNMTPQVDECQGYCQGEIYNWLRAYNSIHGYVSLMICIFGTIANILNIMVLTRKE 102
            :|:::.|:       .::..:.:|  .|..::..:|....:|..:..|.||:..::::.:||||.
 Worm     5 YVEMFPEF-------GIESIRVFC--AIAYFMGTFNYYSDHVHFVALIVGTVLGVIHLTILTRKC 60

  Fly   103 MAKTPINNILKWLAVADMF----VMLEYIPYTSYQYIYMGPGE-KDLSYTWAVCLL-VHMHFTQI 161
            |....||..|..:|.|::|    :::.:||:...:|:.....: .|.:.|.||... :...|.::
 Worm    61 MRALSINVFLIGIAAAEIFRAICILIIFIPFFDLRYLSDEVSDCSDPNSTVAVLSYNISASFMRL 125

  Fly   162 LHTISIGLTVTLAVWRYVAIRHPNGGCANFLLAHS---REAILLPFILSPILCLPTYFVFQVRET 223
            ...:|:...|.:||.|.:.:|:|..|..|.|....   |..:|:..::.| ...|:||       
 Worm   126 AEKVSVWFAVAIAVIRTLVMRYPVNGRINCLTQAKYGFRIVVLITLLIIP-FGAPSYF------- 182

  Fly   224 YDVDKVN----------------SEAMYHVYFDKDSV-------LYRFNFWIHSVLIKLLPCGIL 265
                |:|                ||....:.||..|.       :|:....|..:.::..|..||
 Worm   183 ----KLNSTSVRGWTPFTNCVTFSENSTKIKFDSHSTELFGSTDVYKIALLIEGIFLEFTPSIIL 243

  Fly   266 IVISAVLMHVLCEASRRRLKLRDYNNPAKYAIQLNLNETKSKKPPRCDRRND--RTTLLLVAVLV 328
            .:.:..|:..|.:|.:..|                  .|||..     ..:|  |:..|:..|.:
 Worm   244 PITTISLIMDLRKARKNSL------------------STKSSA-----SSSDAVRSIKLVAFVTI 285

  Fly   329 LFLITEFPQG---LLGL----LSGVMEKCFFAHCYPPFGELMDLLALINAAVGFVLYGLMSKQFR 386
            .||.|..|.|   ::|:    :.||:      .....|..::..|..::.....::..|||.|:|
 Worm   286 TFLFTTTPLGFMYIVGIFIVKMPGVI------MIVTKFARVLTFLTTLSGIAHILICYLMSTQYR 344

  Fly   387 TTFRSLFMKRH--FGST 401
            :|...:|.|:.  |.||
 Worm   345 STAHEMFGKKEKIFKST 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13229NP_610637.1 7tmA_FMRFamide_R-like 75..389 CDD:410630 77/354 (22%)
TM helix 1 75..101 CDD:410630 6/25 (24%)
TM helix 2 108..133 CDD:410630 8/28 (29%)
TM helix 3 152..182 CDD:410630 6/30 (20%)
TM helix 4 194..214 CDD:410630 3/22 (14%)
TM helix 5 246..271 CDD:410630 5/24 (21%)
TM helix 6 314..344 CDD:410630 10/38 (26%)
TM helix 7 357..382 CDD:410630 3/24 (13%)
srw-31NP_507435.2 7TM_GPCR_Srw 36..354 CDD:402097 79/358 (22%)
TM helix 1 39..58 CDD:410628 4/18 (22%)
TM helix 2 67..89 CDD:410628 5/21 (24%)
TM helix 3 117..139 CDD:410628 3/21 (14%)
TM helix 4 164..180 CDD:410628 3/16 (19%)
TM helix 5 225..248 CDD:410628 4/22 (18%)
TM helix 6 277..299 CDD:410628 7/21 (33%)
TM helix 7 315..340 CDD:410628 3/24 (13%)

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