DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13229 and dmsr-12

DIOPT Version :10

Sequence 1:NP_610637.1 Gene:CG13229 / 36168 FlyBaseID:FBgn0033579 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001309508.1 Gene:dmsr-12 / 186799 WormBaseID:WBGene00019262 Length:160 Species:Caenorhabditis elegans


Alignment Length:143 Identity:37/143 - (25%)
Similarity:64/143 - (44%) Gaps:10/143 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 YVSLMICIFGTIANILNIMVLTRKEMAKTPINNILKWLAVADMFVML-EYIPYTSYQYIYMGPGE 141
            |:..:.| |...|||:.:.||:.|||.::.:|..:..:||.|....: |.:....:.|     .:
 Worm    17 YIHFLSC-FAFFANIMIVKVLSHKEMIRSGVNVTMLLIAVCDFGCSIAELLKLFLWSY-----SD 75

  Fly   142 KDLSYTWAVCLLVHMHFTQILHTISIGLTVTLAVWRYVAIRHPNGGCANFLLAHSREAILLPFIL 206
            |.:||..|...||..:.....|..|:.|.|.:|..|..::...|..  |.|......|:.:...|
 Worm    76 KYISYPTAYGRLVIYYLAAAFHASSLYLAVGMAFCRVKSLNFANRN--NDLWQSPNYAVRVACAL 138

  Fly   207 -SPILCLPTYFVF 218
             :|:..:.|:.:|
 Worm   139 CAPVFLITTFILF 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13229NP_610637.1 7tmA_FMRFamide_R-like 75..389 CDD:410630 37/143 (26%)
TM helix 1 75..101 CDD:410630 8/22 (36%)
TM helix 2 108..133 CDD:410630 5/25 (20%)
TM helix 3 152..182 CDD:410630 8/29 (28%)
TM helix 4 194..214 CDD:410630 3/20 (15%)
TM helix 5 246..271 CDD:410630
TM helix 6 314..344 CDD:410630
TM helix 7 357..382 CDD:410630
dmsr-12NP_001309508.1 7tm_GPCRs 13..>157 CDD:475119 37/143 (26%)
TM helix 1 14..38 CDD:410628 8/21 (38%)
TM helix 2 47..69 CDD:410628 5/21 (24%)
TM helix 3 87..109 CDD:410628 6/21 (29%)
TM helix 4 133..149 CDD:410628 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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