DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13229 and dmsr-7

DIOPT Version :9

Sequence 1:NP_001260880.1 Gene:CG13229 / 36168 FlyBaseID:FBgn0033579 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_504431.2 Gene:dmsr-7 / 178922 WormBaseID:WBGene00016428 Length:429 Species:Caenorhabditis elegans


Alignment Length:390 Identity:110/390 - (28%)
Similarity:191/390 - (48%) Gaps:54/390 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQVDECQGYCQGEIYNWLRAYNSIHGYVSLMICIFGTIANILNIMVLTRKEMAKTPINNILKWLA 116
            |..:..|.:.: ::.::.|.|..|||||.::||:||...|.:::.||:|..|..:.:|.||..:|
 Worm    12 PNSNSTQAFLR-KLAHFQRWYQPIHGYVCVLICVFGIFTNFVHVAVLSRPNMRNSAVNCILTAVA 75

  Fly   117 VADMFVMLEYIPYTSYQYIYMGPG-EKDLSYTWAVCLLVHMHFTQILHTISIGLTVTLAVWRYVA 180
            |.|:..|..|:.|..:..:..... ....:::|...||.|:..:..|||.|:.|.|.:|..|.:.
 Worm    76 VCDIGTMASYLIYIIHFVLRRNNSCTPTFTHSWLQFLLWHVVLSITLHTTSLWLAVAMAFIRRMT 140

  Fly   181 IR---------HPNGGCANFLLAHSREAILLPFILSPILCLPTYFVFQVRETYDVD--------- 227
            :|         .|.         .:.:..|..:::..:||:|...|.::......|         
 Worm   141 LRVTALNSQWQRPK---------FAWKLCLGIYMVVFVLCIPNMLVHEIARVEGNDWRPGKTCQK 196

  Fly   228 --KVNSEAMY-----HVYFDKDSVLYRFNFWIHSVLIKLLPCGILIVISAVLMHVLCEASRRRLK 285
              ...||.:|     |.....:..|:::|.|:..:|.|::||.:||.:|..|:..:.:|.:.|.|
 Worm   197 FASNYSEPVYTFMVSHAATINNCRLFKWNIWMIGILFKIIPCILLIFLSFGLVSKIRDAEKHRRK 261

  Fly   286 LRDYNNPAKYAIQLNLNETKSKKPPRCDRRNDRTTLLLVAVLVLFLITEFPQGLLGLLSGVMEKC 350
            |....:.|         .|.||...:.:..:|||||:||.:|::|||||||||::.:|..:....
 Worm   262 LTSVPSNA---------STDSKPLKKKNGTSDRTTLMLVVILLVFLITEFPQGIISILCAIFTTD 317

  Fly   351 FFAHCYPPFGELMDLLALINAAVGFVLYGLMSKQFRTTF---------RSLFMKRHFGSTEMTRL 406
            ...:.|...|:::|||:|:|::|.||||.:||.::|.||         ..|:..|....||:::|
 Worm   318 VHRYLYFYIGDVLDLLSLVNSSVNFVLYCVMSSRYRQTFWEVIIPSWACGLWTTRRGSPTELSQL 382

  Fly   407  406
             Worm   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13229NP_001260880.1 7tm_4 78..393 CDD:304433 98/349 (28%)
dmsr-7NP_504431.2 7tmA_FMRFamide_R-like 33..356 CDD:320109 99/340 (29%)
TM helix 1 35..59 CDD:320109 11/23 (48%)
TM helix 2 68..90 CDD:320109 9/21 (43%)
TM helix 3 113..135 CDD:320109 8/21 (38%)
TM helix 4 158..174 CDD:320109 3/15 (20%)
TM helix 5 223..246 CDD:320109 8/22 (36%)
TM helix 6 284..309 CDD:320109 17/24 (71%)
TM helix 7 324..349 CDD:320109 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BWNV
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28978
OrthoDB 1 1.010 - - D343117at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14331
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46273
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X861
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.980

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