DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13229 and dmsr-7

DIOPT Version :10

Sequence 1:NP_610637.1 Gene:CG13229 / 36168 FlyBaseID:FBgn0033579 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_504431.2 Gene:dmsr-7 / 178922 WormBaseID:WBGene00016428 Length:429 Species:Caenorhabditis elegans


Alignment Length:390 Identity:110/390 - (28%)
Similarity:191/390 - (48%) Gaps:54/390 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQVDECQGYCQGEIYNWLRAYNSIHGYVSLMICIFGTIANILNIMVLTRKEMAKTPINNILKWLA 116
            |..:..|.:.: ::.::.|.|..|||||.::||:||...|.:::.||:|..|..:.:|.||..:|
 Worm    12 PNSNSTQAFLR-KLAHFQRWYQPIHGYVCVLICVFGIFTNFVHVAVLSRPNMRNSAVNCILTAVA 75

  Fly   117 VADMFVMLEYIPYTSYQYIYMGPG-EKDLSYTWAVCLLVHMHFTQILHTISIGLTVTLAVWRYVA 180
            |.|:..|..|:.|..:..:..... ....:::|...||.|:..:..|||.|:.|.|.:|..|.:.
 Worm    76 VCDIGTMASYLIYIIHFVLRRNNSCTPTFTHSWLQFLLWHVVLSITLHTTSLWLAVAMAFIRRMT 140

  Fly   181 IR---------HPNGGCANFLLAHSREAILLPFILSPILCLPTYFVFQVRETYDVD--------- 227
            :|         .|.         .:.:..|..:::..:||:|...|.::......|         
 Worm   141 LRVTALNSQWQRPK---------FAWKLCLGIYMVVFVLCIPNMLVHEIARVEGNDWRPGKTCQK 196

  Fly   228 --KVNSEAMY-----HVYFDKDSVLYRFNFWIHSVLIKLLPCGILIVISAVLMHVLCEASRRRLK 285
              ...||.:|     |.....:..|:::|.|:..:|.|::||.:||.:|..|:..:.:|.:.|.|
 Worm   197 FASNYSEPVYTFMVSHAATINNCRLFKWNIWMIGILFKIIPCILLIFLSFGLVSKIRDAEKHRRK 261

  Fly   286 LRDYNNPAKYAIQLNLNETKSKKPPRCDRRNDRTTLLLVAVLVLFLITEFPQGLLGLLSGVMEKC 350
            |....:.|         .|.||...:.:..:|||||:||.:|::|||||||||::.:|..:....
 Worm   262 LTSVPSNA---------STDSKPLKKKNGTSDRTTLMLVVILLVFLITEFPQGIISILCAIFTTD 317

  Fly   351 FFAHCYPPFGELMDLLALINAAVGFVLYGLMSKQFRTTF---------RSLFMKRHFGSTEMTRL 406
            ...:.|...|:::|||:|:|::|.||||.:||.::|.||         ..|:..|....||:::|
 Worm   318 VHRYLYFYIGDVLDLLSLVNSSVNFVLYCVMSSRYRQTFWEVIIPSWACGLWTTRRGSPTELSQL 382

  Fly   407  406
             Worm   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13229NP_610637.1 7tmA_FMRFamide_R-like 75..389 CDD:410630 99/339 (29%)
TM helix 1 75..101 CDD:410630 12/25 (48%)
TM helix 2 108..133 CDD:410630 9/24 (38%)
TM helix 3 152..182 CDD:410630 11/29 (38%)
TM helix 4 194..214 CDD:410630 3/19 (16%)
TM helix 5 246..271 CDD:410630 9/24 (38%)
TM helix 6 314..344 CDD:410630 17/29 (59%)
TM helix 7 357..382 CDD:410630 11/24 (46%)
dmsr-7NP_504431.2 7tmA_FMRFamide_R-like 33..356 CDD:410630 99/340 (29%)
TM helix 1 34..60 CDD:410630 12/25 (48%)
TM helix 2 67..92 CDD:410630 9/24 (38%)
TM helix 3 112..142 CDD:410630 11/29 (38%)
TM helix 4 154..174 CDD:410630 3/28 (11%)
TM helix 5 222..247 CDD:410630 9/24 (38%)
TM helix 6 281..311 CDD:410630 17/29 (59%)
TM helix 7 324..349 CDD:410630 11/24 (46%)

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