DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and TMTC4

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001337500.1 Gene:TMTC4 / 84899 HGNCID:25904 Length:818 Species:Homo sapiens


Alignment Length:337 Identity:71/337 - (21%)
Similarity:127/337 - (37%) Gaps:103/337 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LNPEYLYFV-QGLIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREA 127
            ||.:..|.: :.|.|:  ||...|:|:.:::..|||:.:.....:|..|                
Human   557 LNAKVHYNIGKNLADK--GNQTAAIRYYREAVRLNPKYVHAMNNLGNIL---------------- 603

  Fly   128 EQRSSRQDHEIYHYLGELLYRAATTQSQKDVAS------------QQQDEARTYFELAVQSGRKL 180
            ::|:..|:.|      |||  :...|.|.|.|:            ::.:.|...:..|::..||.
Human   604 KERNELQEAE------ELL--SLAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKHRRKY 660

  Fly   181 -ESYVRLAELYRKDKQYQKAIEILENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIE 244
             :.|..|..||....::..|:....|...|.||:|.....:.:|   ::.|    ..||:..::.
Human   661 PDCYYNLGRLYADLNRHVDALNAWRNATVLKPEHSLAWNNMIIL---LDNT----GNLAQAEAVG 718

  Fly   245 RKCSPKGLLAFGAILQSRNDIDGALSKYSQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKS 309
            |:.                        ...|.|....:..|.|.:|    |.||:..:.:...|:
Human   719 REA------------------------LELIPNDHSLMFSLANVLG----KSQKYKESEALFLKA 755

  Fly   310 VWLSP--LNYNALYNLSLIY-------IASEQYASAFHTLAAAINLRKD-----NAECYMLLGLC 360
            :..:|  .:|:.  ||:::|       :|.:.|         .|:|:.|     ..|.|   ||.
Human   756 IKANPNAASYHG--NLAVLYHRWGHLDLAKKHY---------EISLQLDPTASGTKENY---GLL 806

  Fly   361 LRKLDDMENAFV 372
            .|||:.|:...|
Human   807 RRKLELMQKKAV 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809 7/27 (26%)
LapB 70..347 CDD:442196 58/299 (19%)
TPR repeat 100..130 CDD:276809 2/29 (7%)
TPR repeat 136..175 CDD:276809 10/50 (20%)
TPR repeat 179..209 CDD:276809 7/30 (23%)
TPR repeat 214..242 CDD:276809 5/27 (19%)
TPR repeat 249..277 CDD:276809 1/27 (4%)
BepA 281..423 CDD:443813 26/106 (25%)
TPR repeat 283..311 CDD:276809 7/27 (26%)
TPR repeat 316..346 CDD:276809 7/36 (19%)
TPR repeat 351..377 CDD:276809 9/22 (41%)
TMTC4NP_001337500.1 TMTC_DUF1736 369..443 CDD:462468
TPR 552..763 CDD:440225 53/266 (20%)
TPR repeat 559..587 CDD:276809 7/29 (24%)
TPR repeat 592..622 CDD:276809 8/53 (15%)
TPR repeat 627..655 CDD:276809 3/27 (11%)
TPR repeat 661..687 CDD:276809 5/25 (20%)
TPR repeat 695..723 CDD:276809 6/58 (10%)
NrfG 713..>815 CDD:443378 28/143 (20%)
TPR repeat 728..758 CDD:276809 7/33 (21%)
TPR repeat 763..791 CDD:276809 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.

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