DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and AT5G63200

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_201125.2 Gene:AT5G63200 / 836441 AraportID:AT5G63200 Length:649 Species:Arabidopsis thaliana


Alignment Length:515 Identity:106/515 - (20%)
Similarity:181/515 - (35%) Gaps:142/515 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VVRPAPKMPSDANIDWLLHIYFTR--------REFTRCRRLI---ERELNRHLNPEYLYFVQ--- 73
            ::..|.|||.:|:..::|.:.|.|        .|:.:...::   |.|:.|   ||.|..||   
plant   129 LIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEILLGCEPEIAR---PELLLLVQIHH 190

  Fly    74 -------GLIDRE-----EGNHI-EALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGV-- 123
                   |..|.:     ||..: |.|..|:.|.:|:.|....:..:|..|...|....|:.|  
plant   191 GQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQAAVWNTLGLMLLKAGCLMSAISVLS 255

  Fly   124 --------------------------------FREAEQRSSRQDHEIYHYLGELLYRAATT---- 152
                                            |::...:.......:.:|..|||.:.::|    
plant   256 SLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAAELLCKHSSTVAGA 320

  Fly   153 --QSQKDVASQQQ---DEARTYFELAVQSGRK-LESYVRLAELYRKDKQYQKAIEILENCLHLTP 211
              ....|.:..|:   :.|:.....|::|..| ..::|.||..|.....::.:.:.||....|.|
plant   321 GANGGADASEDQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMMGDHRSSSKCLEKAAKLDP 385

  Fly   212 ENSEVLIEISVLYLKINE-TQKAHDRLA-------------EVVSIERKCSPKGLL--------A 254
            ........::|..:|..| :|.|.|:|:             |.|.|:...:..||.        .
plant   386 NCMATRFAVAVQRIKDAERSQDASDQLSWAGNEMASVIREGESVPIDPPIAWAGLAMAHKAQHEI 450

  Fly   255 FGAILQSRNDI----DGALSKYSQIANAEPEIAELWNNIG---LC---FFKKQKFIVAI------ 303
            ..|.:..||::    :.|:....|....:||.|..|:.:|   ||   :...||::.|.      
plant   451 AAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWHQLGLHSLCSQQYKLSQKYLKAAVGRSRE 515

  Fly   304 -----SSLRKSVWLSPLNYNA-------------------LYNLSLIYIASEQYASAFHTLAAAI 344
                 |:|..|:.||..:..|                   |.||..:|...:||..:....:.|:
plant   516 CSYAWSNLGISLQLSDEHSEAEEVYKRALTVSKEDQAHAILSNLGNLYRQKKQYEVSKAMFSKAL 580

  Fly   345 NLRKDNAECYMLLGLCL---RKLDDMENAFVALERASSMATGQQGAGRNPLVVLNFALFC 401
            .|:...|..|..|||..   |:.::.::.|.....|.|:....|.   |.|.....:..|
plant   581 ELKPGYAPAYNNLGLVFVAERRWEEAKSCFEKSLEADSLLDAAQS---NLLKATTMSRLC 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809 11/42 (26%)
LapB 70..347 CDD:442196 77/398 (19%)
TPR repeat 100..130 CDD:276809 6/63 (10%)
TPR repeat 136..175 CDD:276809 9/47 (19%)
TPR repeat 179..209 CDD:276809 7/30 (23%)
TPR repeat 214..242 CDD:276809 8/41 (20%)
TPR repeat 249..277 CDD:276809 7/39 (18%)
BepA 281..423 CDD:443813 36/160 (23%)
TPR repeat 283..311 CDD:276809 11/44 (25%)
TPR repeat 316..346 CDD:276809 8/48 (17%)
TPR repeat 351..377 CDD:276809 7/28 (25%)
AT5G63200NP_201125.2 PEP_TPR_lipo <137..615 CDD:274350 97/480 (20%)
TPR repeat 231..259 CDD:276809 5/27 (19%)
TPR repeat 265..293 CDD:276809 1/27 (4%)
TPR repeat 298..349 CDD:276809 9/50 (18%)
TPR repeat 354..382 CDD:276809 6/27 (22%)
Spy 402..>628 CDD:443119 50/228 (22%)
TPR repeat 483..511 CDD:276809 8/27 (30%)
TPR repeat 517..545 CDD:276809 6/27 (22%)
TPR repeat 550..582 CDD:276809 7/31 (23%)
TPR repeat 587..615 CDD:276809 7/27 (26%)

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