DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BBS4 and TOC64-V

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_196504.2 Gene:TOC64-V / 830801 AraportID:AT5G09420 Length:603 Species:Arabidopsis thaliana


Alignment Length:147 Identity:31/147 - (21%)
Similarity:57/147 - (38%) Gaps:29/147 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 DVASQQQDEARTYFELAVQSGRKLESYVRLAELYR-------KDKQYQKAIEILENCLHLTPENS 214
            ||.:..||:|:....||..|  .....:..:|:.:       |.||:.||:......:.|...|:
plant   460 DVYASLQDQAKLASNLAPVS--DTNGNMEASEVMKEKGNAAYKGKQWNKAVNFYTEAIKLNGANA 522

  Fly   215 EVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPKGLLAFGAILQSRNDIDGALSKYSQIA--- 276
            ......:..:|::...|:|.....:.:.|::| :.|..|..|...:|       |.:|.:.|   
plant   523 TYYCNRAAAFLELCCFQQAEQDCTKAMLIDKK-NVKAYLRRGTARES-------LVRYKEAAADF 579

  Fly   277 ---------NAEPEIAE 284
                     |...::||
plant   580 RHALVLEPQNKTAKVAE 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809
LapB 70..347 CDD:442196 31/147 (21%)
TPR repeat 100..130 CDD:276809
TPR repeat 136..175 CDD:276809 7/17 (41%)
TPR repeat 179..209 CDD:276809 6/36 (17%)
TPR repeat 214..242 CDD:276809 3/27 (11%)
TPR repeat 249..277 CDD:276809 7/39 (18%)
BepA 281..423 CDD:443813 2/4 (50%)
TPR repeat 283..311 CDD:276809 2/2 (100%)
TPR repeat 316..346 CDD:276809
TPR repeat 351..377 CDD:276809
TOC64-VNP_196504.2 Amidase 43..465 CDD:450241 2/4 (50%)
TPR repeat 488..516 CDD:276809 6/27 (22%)
TPR 495..>592 CDD:440225 20/104 (19%)
TPR repeat 521..551 CDD:276809 4/29 (14%)
TPR repeat 556..583 CDD:276809 7/33 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.