DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BBS4 and bbs4

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001070934.2 Gene:bbs4 / 768303 ZFINID:ZDB-GENE-060126-2 Length:528 Species:Danio rerio


Alignment Length:486 Identity:157/486 - (32%)
Similarity:265/486 - (54%) Gaps:41/486 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IELP-TLEVVRP----APKMPSDANIDWLLHIYFTRREFTRCRRLIERELNRHLNP-EYLYFVQG 74
            ::|| ..|:.:|    ||::|.....:||:|:::.|:::..|:.:::.:|:..... ||..:||.
Zfish    10 VQLPVATELKKPRLKKAPELPILEKRNWLIHLHYIRKDYETCKAIVKEQLHETQGMCEYAVYVQA 74

  Fly    75 LIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREAEQRSSRQDHEIY 139
            ||.|.||...|:|...|..|.:||.:.:..|::.|:|:::|:...|:.|:.|| .|.:::|.||.
Zfish    75 LIMRLEGKIQESLELFQSCAIINPTSSDNLKQVARSLFLLGKHKAAIEVYNEA-ARLNQKDWEIS 138

  Fly   140 HYLGE-LLYRAATTQSQKDVASQQQDEARTYFELAVQSGRKLESYVRLAELYRKDKQYQKAIEIL 203
            |.||. .:|       .||..|.::.     ..||:|..:...:|:.|.:::......:|||::.
Zfish   139 HNLGVCYIY-------TKDFRSAEEQ-----LNLALQLNKHDLTYMMLGKIHLLQGDTEKAIDVY 191

  Fly   204 ENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPKGLLAFGAILQSRNDIDGA 268
            ::.:..:|||:|:|..:.:||:::.:.|||.:.|...::.:.. :.|.:||.|:::|:..|.|.|
Zfish   192 KSAVEFSPENTELLTTLGLLYMQLGKYQKAFEHLGNALTYDPN-NFKAILAAGSMMQTHGDYDVA 255

  Fly   269 LSKYSQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKSVWLSPLNYNALYNLSLIYIASEQY 333
            ::||...|.|.||...||||||:|||.|:|::.|||.|:::.:|||.::..||||.|:::..:|:
Zfish   256 MNKYRVAAYAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLSPFDWKILYNLGLVHLTMQQF 320

  Fly   334 ASAFHTLAAAINLRKDNAECYMLLGLCLRKLDDMENAFVALERASSMATGQQGAGRNPLVVLNFA 398
            |||||.|:||||||...:|.||||.:.|..|||.|||..:.|:|..:...      :|||.||||
Zfish   321 ASAFHFLSAAINLRPRMSELYMLLAVALTNLDDAENARRSYEQAVQIDES------SPLVNLNFA 379

  Fly   399 LFCYETGRLALSTEQY-------NRFMSQAQDLLLPTEYKFQATKLKSLLRISNQGNGILLDSAD 456
            :|.|..|....:..||       |..:..:.:.....|....|.||...|:.     |..|..:.
Zfish   380 VFLYNQGDKKAALLQYQEMERKVNTQLENSSNTEFDPELVEMAQKLGGALQA-----GENLYWSK 439

  Fly   457 MGESDLGHNRATELLP--DELPLEVNAVVSQ 485
            .|:......|::...|  .:.||..|..:.|
Zfish   440 PGKDGKTSQRSSSSKPSGSQQPLGTNQALGQ 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 21/64 (33%)
TPR repeat 68..95 CDD:276809 11/26 (42%)
TPR_12 97..175 CDD:290160 23/78 (29%)
TPR repeat 100..130 CDD:276809 8/29 (28%)
TPR repeat 136..175 CDD:276809 11/39 (28%)
TPR repeat 179..209 CDD:276809 5/29 (17%)
TPR_19 190..254 CDD:291240 15/63 (24%)
TPR repeat 214..242 CDD:276809 8/27 (30%)
TPR repeat 249..277 CDD:276809 10/27 (37%)
TPR_11 283..348 CDD:290150 35/64 (55%)
TPR repeat 283..311 CDD:276809 15/27 (56%)
TPR repeat 316..346 CDD:276809 15/29 (52%)
TPR repeat 351..377 CDD:276809 13/25 (52%)
bbs4NP_001070934.2 TPR repeat 68..95 CDD:276809 11/26 (42%)
TPR_11 100..166 CDD:290150 22/78 (28%)
TPR repeat 104..129 CDD:276809 8/25 (32%)
TPR repeat 134..164 CDD:276809 12/41 (29%)
TPR_11 169..233 CDD:290150 16/63 (25%)
TPR repeat 169..196 CDD:276809 5/26 (19%)
TPR repeat 202..229 CDD:276809 8/26 (31%)
TPR_11 235..301 CDD:290150 30/65 (46%)
TPR repeat 237..264 CDD:276809 10/26 (38%)
TPR repeat 270..298 CDD:276809 15/27 (56%)
PH-like <272..340 CDD:302622 36/67 (54%)
TPR_11 272..335 CDD:290150 35/62 (56%)
TPR repeat 303..333 CDD:276809 15/29 (52%)
TPR_11 305..369 CDD:290150 32/63 (51%)
TPR repeat 338..366 CDD:276809 14/27 (52%)
TPR repeat 372..397 CDD:276809 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13197
Inparanoid 1 1.050 243 1.000 Inparanoid score I3286
OMA 1 1.010 - - QHG56334
OrthoDB 1 1.010 - - D334820at33208
OrthoFinder 1 1.000 - - FOG0004654
OrthoInspector 1 1.000 - - otm25243
orthoMCL 1 0.900 - - OOG6_104728
Panther 1 1.100 - - LDO PTHR44186
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3845
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.840

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