DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and spag1b

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001070789.1 Gene:spag1b / 768178 ZFINID:ZDB-GENE-061013-512 Length:591 Species:Danio rerio


Alignment Length:144 Identity:31/144 - (21%)
Similarity:58/144 - (40%) Gaps:39/144 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 ALGVFREAEQRSSRQDHEIYHYLGELLYRAATTQSQKDVASQQQD------------EARTYF-- 170
            |..|..|.:||.|.             ..|.|.|.::..|.:::|            ||..|:  
Zfish   168 AAAVCPEVQQRLSS-------------CTALTAQEKQTAALREKDKGNEAYRSRDYEEALDYYCR 219

  Fly   171 ELAVQS-----GRKLESYVRLAELYRKDKQYQKAIEILENCLHLTPENSEVLIEISVLYLKINET 230
            .|::.|     ..:.::.:||       :|:..|:...:..|.|.|.|.:.|:..:.::..:...
Zfish   220 SLSLASSAAVFNNRAQTLIRL-------QQWPAALSDCDAVLQLEPHNIKALLRRATVHKHLGHQ 277

  Fly   231 QKAHDRLAEVVSIE 244
            |::||.|..|:.|:
Zfish   278 QESHDDLRAVLQIQ 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 2/6 (33%)
TPR repeat 68..95 CDD:276809
TPR_12 97..175 CDD:290160 15/68 (22%)
TPR repeat 100..130 CDD:276809 3/9 (33%)
TPR repeat 136..175 CDD:276809 9/52 (17%)
TPR repeat 179..209 CDD:276809 5/29 (17%)
TPR_19 190..254 CDD:291240 13/55 (24%)
TPR repeat 214..242 CDD:276809 6/27 (22%)
TPR repeat 249..277 CDD:276809
TPR_11 283..348 CDD:290150
TPR repeat 283..311 CDD:276809
TPR repeat 316..346 CDD:276809
TPR repeat 351..377 CDD:276809
spag1bNP_001070789.1 TPR_11 194..258 CDD:290150 13/70 (19%)
TPR repeat 198..222 CDD:276809 4/23 (17%)
TPR repeat 226..256 CDD:276809 5/36 (14%)
TPR_16 233..294 CDD:290168 15/66 (23%)
TPR repeat 261..289 CDD:276809 6/27 (22%)
TPR repeat 483..513 CDD:276809
TPR_11 486..548 CDD:290150
TPR_1 486..517 CDD:278916
TPR repeat 518..546 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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