DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and KDM6A

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001406738.1 Gene:KDM6A / 7403 HGNCID:12637 Length:1489 Species:Homo sapiens


Alignment Length:278 Identity:56/278 - (20%)
Similarity:106/278 - (38%) Gaps:45/278 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 RKLESYVRLAELYRKDKQYQKAIE----ILENCLHLTPENSEVLIEISVLY---LKINETQKAHD 235
            |..|.::||..:::.:..|:.:::    .|.:|...|..|:|:...|:.||   .|.:..::|::
Human   165 RAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAHLYETQRKYHSAKEAYE 229

  Fly   236 RLAEVVSIERKCSPKGLLAFGAILQSRNDIDG--------ALSKYSQIANAEPEIAELWNNIGLC 292
            :|.:..::..:.....|...| .:....|:.|        |:....:...|:|...:.|..:|.|
Human   230 QLLQTENLSAQVKATVLQQLG-WMHHTVDLLGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRC 293

  Fly   293 FFKKQKFIVAISSLRKSVWLSPLNYNALYNLSLIYIASEQYASAFHTLAAAINLRKDNAECYMLL 357
            :....|...|..|.|:|:..|..:.:...::.::|....|...|......|:.|...:|..:|.|
Human   294 YSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDL 358

  Fly   358 GLCLRKLDDMENA---FVALERASSMATGQQGAGRNPLVVLNFALFCYETGRLALSTEQYNRFMS 419
            |......:..::|   ::...|:.|                     |..|..||...:..     
Human   359 GTLYESCNQPQDAIKCYLNATRSKS---------------------CSNTSALAARIKYL----- 397

  Fly   420 QAQDLLLPTEYKFQATKL 437
            |||...||.......|||
Human   398 QAQLCNLPQGSLQNKTKL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809
LapB 70..347 CDD:442196 36/183 (20%)
TPR repeat 100..130 CDD:276809
TPR repeat 136..175 CDD:276809
TPR repeat 179..209 CDD:276809 6/33 (18%)
TPR repeat 214..242 CDD:276809 7/30 (23%)
TPR repeat 249..277 CDD:276809 5/35 (14%)
BepA 281..423 CDD:443813 27/144 (19%)
TPR repeat 283..311 CDD:276809 8/27 (30%)
TPR repeat 316..346 CDD:276809 4/29 (14%)
TPR repeat 351..377 CDD:276809 5/28 (18%)
KDM6ANP_001406738.1 TPR repeat 93..121 CDD:276809
BepA 98..233 CDD:443813 16/67 (24%)
TPR repeat 129..159 CDD:276809
TPR repeat 164..194 CDD:276809 5/28 (18%)
LapB 171..443 CDD:442196 54/272 (20%)
TPR repeat 205..233 CDD:276809 7/27 (26%)
TPR repeat 243..278 CDD:276809 5/35 (14%)
TPR repeat 285..312 CDD:276809 8/26 (31%)
TPR repeat 317..347 CDD:276809 4/29 (14%)
TPR repeat 352..378 CDD:276809 5/25 (20%)
JmjC 1151..1215 CDD:214721
JmjC 1185..1293 CDD:396791
Blue background indicates that the domain is not in the aligned region.

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