DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and Ifit1bl1

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001095075.1 Gene:Ifit1bl1 / 667373 MGIID:3650685 Length:470 Species:Mus musculus


Alignment Length:285 Identity:62/285 - (21%)
Similarity:105/285 - (36%) Gaps:80/285 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 NPEY---LYFVQGLIDREEGNHIEALRHLQKSAELNPRN-----------------IETYKEIGR 109
            ||||   ...|...:|..:|.   :|:||||:..:.|.:                 .|..|.|..
Mouse   179 NPEYNAGYAVVAYRLDHIDGT---SLQHLQKAVSVKPEDPYLKVLLALKLQDLHKLEEAEKHIEE 240

  Fly   110 TL-------YIMG---RFSQALGVFREAEQRSSRQDHE-----IYHYLGELLYRAATTQSQKDVA 159
            ||       |:.|   :|.:..|:.:||.:...|...:     ..|:...|.::....|.:|...
Mouse   241 TLPRISSQPYVFGYVAKFYRRKGLVKEALEFLGRALQKQPCSTFLHFQIGLCHKKRLIQIKKASN 305

  Fly   160 SQQQDEARTYFELAVQSG-----RKLE-------SYVRLAELYRKDKQYQKAIEILENCLHLTPE 212
            .|.:.|.|...:.::...     |.||       :||.|||:|.:..|.::|.:..:..|:::..
Mouse   306 MQPRGEDRKRADQSIHLAICHFKRTLELKPTYVMAYVTLAEMYIEKNQLKEAEDNFQKLLNMSNL 370

  Fly   213 NSEVLIEISVLY---------------------LKINETQ-------KAHDRLAEVVSIERKCSP 249
            ...:..||...|                     |||..|.       ||.::||:....:.....
Mouse   371 EDHIQQEIHFRYGNFQQYYKKSEEAAITHYLKGLKIEVTSHYRDKPLKALEKLAKRRKEDHVLEN 435

  Fly   250 KGLLAFGAILQSRNDIDGALSKYSQ 274
            .|||.|  :.:.:.:...|:|.|.:
Mouse   436 LGLLGF--VYKLKGNTSEAMSCYER 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 22/91 (24%)
TPR repeat 68..95 CDD:276809 9/29 (31%)
TPR_12 97..175 CDD:290160 20/109 (18%)
TPR repeat 100..130 CDD:276809 11/56 (20%)
TPR repeat 136..175 CDD:276809 7/43 (16%)
TPR repeat 179..209 CDD:276809 11/36 (31%)
TPR_19 190..254 CDD:291240 17/91 (19%)
TPR repeat 214..242 CDD:276809 11/55 (20%)
TPR repeat 249..277 CDD:276809 7/26 (27%)
TPR_11 283..348 CDD:290150
TPR repeat 283..311 CDD:276809
TPR repeat 316..346 CDD:276809
TPR repeat 351..377 CDD:276809
Ifit1bl1NP_001095075.1 TPR_12 62..132 CDD:290160
TPR repeat 63..94 CDD:276809
TPR repeat 99..129 CDD:276809
TPR repeat 144..174 CDD:276809
TPR_16 153..215 CDD:290168 13/38 (34%)
TPR repeat 179..210 CDD:276809 12/33 (36%)
TPR repeat 215..242 CDD:276809 3/26 (12%)
TPR repeat 249..277 CDD:276809 7/27 (26%)
TPR repeat 282..333 CDD:276809 9/50 (18%)
TPR_11 <323..368 CDD:290150 12/44 (27%)
Capsule_synth <330..>434 CDD:304472 22/103 (21%)
TPR repeat 338..365 CDD:276809 8/26 (31%)
TPR repeat 376..405 CDD:276809 3/28 (11%)
TPR repeat 430..461 CDD:276809 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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