DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and tmtc1

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_001922025.3 Gene:tmtc1 / 555449 ZFINID:ZDB-GENE-070705-219 Length:872 Species:Danio rerio


Alignment Length:427 Identity:93/427 - (21%)
Similarity:172/427 - (40%) Gaps:99/427 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NRHLNPEYLYFVQGLIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFR 125
            |..::..|..|:     :::|.:.||:.|.:.:..|.||:......:|...:   :..:|...:|
Zfish   478 NAKVHYNYANFL-----KDKGRNQEAIYHYKTALRLYPRHASALNNLGTLTH---QAEEAEVYYR 534

  Fly   126 EAEQRSSRQDHEIYHYLGELLYRAATTQSQKDVASQQQDEARTYFELAVQSGRKL-ESYVRLAEL 189
            .|...:.:.:..::: ||.||      :||     .:::||....:.:::.|... ::|..||.|
Zfish   535 RALDINPQHNRALFN-LGNLL------KSQ-----GKEEEAERMLKESIRFGPHFADAYSSLASL 587

  Fly   190 YRKDKQYQKAIEI----LENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPK 250
            |......::|.||    :|||    ||:|::.....|..:......:|.....|.|.::    |.
Zfish   588 YADQGHSKEANEIYTKGIENC----PESSDLHNNYGVFLVDTGRGDRAAFHYQEAVRLK----PA 644

  Fly   251 GLLA---FGAILQSRNDIDGALSKYSQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKSVWL 312
            ..:|   .|.:|:|.||            |.|   ||||       :|:     |:..:||...|
Zfish   645 HYVAMVNLGRLLRSSND------------NKE---AELW-------YKR-----ALQVVRKVDIL 682

  Fly   313 SPLNYNALYNLSLIYIASEQYASAFHTLAAAINLRKDNAECYMLLGLCLRKLDDMENAFVALERA 377
            :|        |..:|..:.:|..|......|..|:.|:.:.::                 ||.:.
Zfish   683 TP--------LGALYYNTGRYEEALEVYREASTLQPDSTDIWL-----------------ALAQV 722

  Fly   378 SSMATGQQGAGRNPLVVLNFALFCYETGRL--ALSTEQYNRFMSQAQDLL---LPTEYKFQATKL 437
            .:||.....|.:..|.:::....|.|..||  |:.::|.|.  ::|.|.|   |..|....|.:.
Zfish   723 LAMAGRSTEAEKMTLGIISKTSNCIECYRLLSAIYSKQGNH--TEALDALKTALQQESSEPAVRA 785

  Fly   438 KSLLRISNQGNGILLDSADMGESDLGHNRATELLPDE 474
            :....:.||    |.:..::..:...:..|.||.|::
Zfish   786 ELHFSMGNQ----LREMNELDRAFQSYKLAVELKPEQ 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809 6/26 (23%)
LapB 70..347 CDD:442196 63/284 (22%)
TPR repeat 100..130 CDD:276809 4/29 (14%)
TPR repeat 136..175 CDD:276809 8/38 (21%)
TPR repeat 179..209 CDD:276809 11/34 (32%)
TPR repeat 214..242 CDD:276809 4/27 (15%)
TPR repeat 249..277 CDD:276809 7/30 (23%)
BepA 281..423 CDD:443813 31/143 (22%)
TPR repeat 283..311 CDD:276809 8/27 (30%)
TPR repeat 316..346 CDD:276809 5/29 (17%)
TPR repeat 351..377 CDD:276809 2/25 (8%)
tmtc1XP_001922025.3 TMTC_DUF1736 287..361 CDD:462468
TPR repeat 479..507 CDD:276809 6/32 (19%)
LapB 483..735 CDD:442196 71/331 (21%)
TPR repeat 512..539 CDD:276809 4/29 (14%)
TPR repeat 544..572 CDD:276809 8/39 (21%)
TPR repeat 578..606 CDD:276809 8/27 (30%)
TPR repeat 611..641 CDD:276809 5/29 (17%)
TPR repeat 646..674 CDD:276809 14/54 (26%)
LapB 652..872 CDD:442196 50/225 (22%)
TPR repeat 712..742 CDD:276809 6/46 (13%)
TPR repeat 747..775 CDD:276809 9/29 (31%)
TPR repeat 784..814 CDD:276809 4/33 (12%)
TPR repeat 819..846 CDD:276809 93/427 (22%)
Blue background indicates that the domain is not in the aligned region.

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