DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and tmtc2b

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_021323440.2 Gene:tmtc2b / 555381 ZFINID:ZDB-GENE-081031-100 Length:837 Species:Danio rerio


Alignment Length:262 Identity:55/262 - (20%)
Similarity:106/262 - (40%) Gaps:45/262 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 YFVQGLIDREEGNHIEALRHLQKSAELNPRNIE---TYK--------EIGRTLYIMGRFSQALGV 123
            |...|::...:|...||.|.....||::..|::   .:|        .:|:.|:..|...:|:.|
Zfish   565 YLNTGIVLMNQGRLEEAKRTFVTCAEISDENLKDPHAHKSSVTSCLYNLGKLLHEQGHQEEAISV 629

  Fly   124 FREAEQRSSRQ--DHEIYHYLGELLYRA-ATTQSQ---KDVASQQQDEA---RTYFELAVQSGRK 179
            ::||.|:..||  ...:|:.:||...|. ..|:::   |:....:.|..   .||.:|...:|:|
Zfish   630 YKEAIQKMPRQFAPQSLYNMMGEAFMRLNKLTEAEHWYKESLRAKPDHIPAHLTYGKLLAMTGQK 694

  Fly   180 LES-----------------YVRLAELYRKDKQYQKAIEILENCLHLTPENSEVLIEISVLYLKI 227
            .|:                 |:...:...::.:..:|.|:.|....|..|..:|:...:.:..:.
Zfish   695 TEAEKFFLKAIELDPTKGNCYMHYGQFLLEESRLLEAAEMAEKAAQLDTEEFDVVFSAAHMLRQA 759

  Fly   228 NETQKAHDRLAEVVSIERKCSPKGLLAFGAILQSRNDIDGALSKYSQIANAEPE-------IAEL 285
            :....|.....:..|: |...|..|:..||||.....:..|.:.|.:....:|:       :.:|
Zfish   760 SLNDAAEKYYRQAASL-RPNYPAALMNLGAILHLNGKLQEAEANYLRALQLKPDDTITQSNLRKL 823

  Fly   286 WN 287
            ||
Zfish   824 WN 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809 6/24 (25%)
LapB 70..347 CDD:442196 55/262 (21%)
TPR repeat 100..130 CDD:276809 9/40 (23%)
TPR repeat 136..175 CDD:276809 10/45 (22%)
TPR repeat 179..209 CDD:276809 6/46 (13%)
TPR repeat 214..242 CDD:276809 2/27 (7%)
TPR repeat 249..277 CDD:276809 8/27 (30%)
BepA 281..423 CDD:443813 3/14 (21%)
TPR repeat 283..311 CDD:276809 3/5 (60%)
TPR repeat 316..346 CDD:276809
TPR repeat 351..377 CDD:276809
tmtc2bXP_021323440.2 None
Blue background indicates that the domain is not in the aligned region.

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