DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and Tpr2

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523584.1 Gene:Tpr2 / 34984 FlyBaseID:FBgn0032586 Length:508 Species:Drosophila melanogaster


Alignment Length:385 Identity:82/385 - (21%)
Similarity:135/385 - (35%) Gaps:100/385 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 REAEQRSSRQDHEIYHYLGELLYRAATTQSQKDVASQQ--QDEARTYFELAVQSGRKLESYVRLA 187
            ||....:|..|.||           .|.|...||.::|  ..:|.|..|...:.|.  :.|    
  Fly    13 REETSSNSEMDVEI-----------TTEQPTIDVKAEQIVPKDAATIAEEKKKLGN--DQY---- 60

  Fly   188 ELYRKDKQYQKAIEILENCLHLTPENSEVLIEISVLY---LKINET--------------QKAHD 235
                |.:.||.|:::..:.:.|.|:::......:..|   |..|..              :||:.
  Fly    61 ----KAQNYQNALKLYTDAISLCPDSAAYYGNRAACYMMLLNYNSALTDARHAIRIDPGFEKAYV 121

  Fly   236 RLAEVVSIERKCSPKGLLAFGAILQSRNDID--GALSKYSQIANAEPEIAELWNNIGLCFFKKQK 298
            |:|       ||    .||.|.|:.:...:.  ..|:..|....||...|:              
  Fly   122 RVA-------KC----CLALGDIIGTEQAVKMVNELNSLSTAVAAEQTAAQ-------------- 161

  Fly   299 FIVAISSLRKSVWLSPLNYNALYNLSLIYIASEQYASAFHTLAAAINLRKDNAECYMLLGLCLRK 363
                  .||:.......||:.....::::...    ||.....|.:..|...|||...||.|...
  Fly   162 ------KLRQLEATIQANYDTKSYRNVVFYLD----SALKLAPACLKYRLLKAECLAFLGRCDEA 216

  Fly   364 LDDMENAFVALERASSMATGQQGAGRNPLVVLNFALFCYETGRLALSTEQYNRFMSQAQDLLLPT 428
            | |:..:.:.|:..|:.|...:|            |..|.|..|......:.|.::     |.|.
  Fly   217 L-DIAVSVMKLDTTSADAIYVRG------------LCLYYTDNLDKGILHFERALT-----LDPD 263

  Fly   429 EYKFQ--ATKLKSLLRISNQGNGILLDSADMGESDLGHNRATELLPDELPLEVNAVVSQN 486
            .||.:  .:|.|.|..:...|| :|..|....|:.:.:..|.::  ||...::|:.:..|
  Fly   264 HYKSKQMRSKCKQLKEMKENGN-MLFKSGRYREAHVIYTDALKI--DEHNKDINSKLLYN 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809
LapB 70..347 CDD:442196 47/242 (19%)
TPR repeat 100..130 CDD:276809 2/4 (50%)
TPR repeat 136..175 CDD:276809 10/40 (25%)
TPR repeat 179..209 CDD:276809 5/29 (17%)
TPR repeat 214..242 CDD:276809 7/44 (16%)
TPR repeat 249..277 CDD:276809 6/29 (21%)
BepA 281..423 CDD:443813 26/141 (18%)
TPR repeat 283..311 CDD:276809 3/27 (11%)
TPR repeat 316..346 CDD:276809 5/29 (17%)
TPR repeat 351..377 CDD:276809 9/25 (36%)
Tpr2NP_523584.1 TPR repeat 49..77 CDD:276809 7/37 (19%)
TPR 55..>258 CDD:440225 51/260 (20%)
TPR repeat 82..112 CDD:276809 3/29 (10%)
TPR 190..419 CDD:440225 36/152 (24%)
TPR repeat 201..225 CDD:276809 8/24 (33%)
TPR repeat 231..259 CDD:276809 7/39 (18%)
TPR repeat 310..344 CDD:276809 2/11 (18%)
TPR repeat 349..377 CDD:276809
DnaJ_bact 402..>503 CDD:274090
Blue background indicates that the domain is not in the aligned region.

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