DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and Ifit3

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001007695.1 Gene:Ifit3 / 309526 RGDID:1359681 Length:411 Species:Rattus norvegicus


Alignment Length:260 Identity:56/260 - (21%)
Similarity:97/260 - (37%) Gaps:45/260 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 NPEYLYFVQGLIDREEGNHIEALRHLQKSAELNPRNIETYK---EIGRTLYIMGRFSQALGVFRE 126
            |..::|:..|.:...:....:..:..||.|  ||.::|..:   |.|.|....||..:|...|.:
  Rat    99 NYAWIYYRIGQLSEAQAYADKVRQVCQKFA--NPYSMECPELDCEEGWTRLKCGRNERAKMCFEK 161

  Fly   127 AEQRSSRQDHEIYHYLGELLYRAATTQSQK----------DVASQQQ----------------DE 165
            |.:... :|.|....:...:||......::          ::.||.|                .|
  Rat   162 ALEEKP-EDPECRAGMAIAMYRLQEKPEKQFSVDALKQAMELNSQNQYEKVLLALKLQKMGEEAE 225

  Fly   166 ARTYFELAVQSG-RKLESYVRLAELYRKDKQYQKAIEILENCLHLTPENSEVLIEISVLYLKINE 229
            |....|.|::.| .:.:...:.|:.|||.....:|||.|...|..|..||.:   .|::..:..|
  Rat   226 AERLVEDALEKGPNQTDVLQKAAQFYRKKGNLDRAIEFLGKALRSTANNSPL---YSLV
MCRYRE 287

  Fly   230 TQKAHDRLAEVVSIERKCSPKGLLA-----FGAILQSRNDIDGALSKYSQIANAEPEIAELWNNI 289
            ..|......|....||:.:.:.|..     ....||.|   ...|:.||.:.:. ||:.:.:..:
  Rat   288 KLKQLQNTGEADKSERRQTMEELRRLTMEYMNKALQRR---PSPLNSYSDLIDF-PEVEKCYQMV 348

  Fly   290  289
              Rat   349  348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 16/64 (25%)
TPR repeat 68..95 CDD:276809 4/26 (15%)
TPR_12 97..175 CDD:290160 22/106 (21%)
TPR repeat 100..130 CDD:276809 9/32 (28%)
TPR repeat 136..175 CDD:276809 10/64 (16%)
TPR repeat 179..209 CDD:276809 9/29 (31%)
TPR_19 190..254 CDD:291240 18/63 (29%)
TPR repeat 214..242 CDD:276809 5/27 (19%)
TPR repeat 249..277 CDD:276809 7/32 (22%)
TPR_11 283..348 CDD:290150 0/7 (0%)
TPR repeat 283..311 CDD:276809 0/7 (0%)
TPR repeat 316..346 CDD:276809
TPR repeat 351..377 CDD:276809
Ifit3NP_001007695.1 TPR_12 51..126 CDD:290160 3/26 (12%)
TPR repeat 51..79 CDD:276809
TPR repeat 93..123 CDD:276809 3/23 (13%)
TPR_12 94..164 CDD:290160 17/66 (26%)
TPR repeat 136..164 CDD:276809 8/27 (30%)
TPR repeat 206..236 CDD:276809 5/29 (17%)
TPR_19 217..281 CDD:291240 18/66 (27%)
TPR repeat 241..269 CDD:276809 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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