DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and Bbs4

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_038937022.1 Gene:Bbs4 / 300754 RGDID:1309134 Length:529 Species:Rattus norvegicus


Alignment Length:445 Identity:153/445 - (34%)
Similarity:246/445 - (55%) Gaps:36/445 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GRLIELPTLEVVRP----APKMPSDANIDWLLHIYFTRREFTRCRRLIERELNRHLN-PEYLYFV 72
            |:|..|..|.:..|    ||:.|....::||:|:|:.|:::..|:.:|:.:|..... .||..:|
  Rat    17 GKLRFLHLLNLKNPGQKKAPEFPIVEKLNWLIHLYYIRKDYEACKAVIKEQLQETQGLCEYAIYV 81

  Fly    73 QGLIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREAEQRSSRQDHE 137
            |.||.|.|||..|:|...|..|.|:|:..:..|::.|:|:::|:...|..|:.|| .:.:::|.|
  Rat    82 QALIFRLEGNIQESLELFQTCAVLSPQCADNLKQVARSLFLLGKHKAATEVYNEA-AKLNQKDWE 145

  Fly   138 IYHYLGELLYRAATTQSQKDVASQQQDEARTYFELAVQSGRKLESYVRLAELYRKDKQYQKAIEI 202
            |.|.|| :.|   |...|   .|:.||:..:    |:|..:...:|:.|.:::.......|||||
  Rat   146 ICHNLG-VCY---TYLKQ---FSKAQDQLHS----ALQLNKHDLTYIMLGKIHLLQGDLDKAIEI 199

  Fly   203 LENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPKGLLAFGAILQSRNDIDG 267
            .:..:..:|||:|:|..:.:|||::...|||.:.|...::.: ..:.|.:||.|:::|:..|.|.
  Rat   200 YKKAVEFSPENTELLTTLGLLYLQLGVYQKAFEHLGNALTYD-PANYKAILAAGSMMQTHGDFDV 263

  Fly   268 ALSKYSQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKSVWLSPLNYNALYNLSLIYIASEQ 332
            ||:||..:|.|.||...||||||:|||.|:|::.|||.|:::.:|:|.::..||||.|:::..:|
  Rat   264 ALTKYRVVACAIPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQ 328

  Fly   333 YASAFHTLAAAINLRKDNAECYMLLGLCLRKLDDMEN---AFVALERASSMATGQQGAGRNPLVV 394
            ||||||.|:||||.:....|.||||.:.|..|:|:||   |:|...|....         ||||.
  Rat   329 YASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYVEAVRLDKC---------NPLVN 384

  Fly   395 LNFALFCYETGRLALSTEQYN------RFMSQAQDLLLPTEYKFQATKLKSLLRI 443
            ||:|:..|..|....:..||.      .|:.....|...:|....|.||.:.|::
  Rat   385 LNYAVLLYNQGEKKGALAQYQEMEKKVHFLKDNNPLEFDSEMVEMAQKLGAALQV 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 22/64 (34%)
TPR repeat 68..95 CDD:276809 12/26 (46%)
TPR_12 97..175 CDD:290160 22/77 (29%)
TPR repeat 100..130 CDD:276809 8/29 (28%)
TPR repeat 136..175 CDD:276809 12/38 (32%)
TPR repeat 179..209 CDD:276809 7/29 (24%)
TPR_19 190..254 CDD:291240 18/63 (29%)
TPR repeat 214..242 CDD:276809 9/27 (33%)
TPR repeat 249..277 CDD:276809 11/27 (41%)
TPR_11 283..348 CDD:290150 34/64 (53%)
TPR repeat 283..311 CDD:276809 15/27 (56%)
TPR repeat 316..346 CDD:276809 16/29 (55%)
TPR repeat 351..377 CDD:276809 12/28 (43%)
Bbs4XP_038937022.1 PEP_TPR_lipo <31..442 CDD:274350 148/431 (34%)
TPR repeat 77..104 CDD:276809 12/26 (46%)
TPR repeat 110..138 CDD:276809 8/28 (29%)
TPR repeat 143..173 CDD:276809 13/40 (33%)
TPR repeat 178..205 CDD:276809 7/26 (27%)
TPR repeat 211..238 CDD:276809 9/26 (35%)
TPR repeat 245..273 CDD:276809 11/27 (41%)
TPR repeat 279..307 CDD:276809 15/27 (56%)
TPR repeat 312..342 CDD:276809 16/29 (55%)
TPR repeat 347..375 CDD:276809 12/27 (44%)
TPR repeat 381..406 CDD:276809 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I8368
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13197
Inparanoid 1 1.050 241 1.000 Inparanoid score I3253
OMA 1 1.010 - - QHG56334
OrthoDB 1 1.010 - - D334820at33208
OrthoFinder 1 1.000 - - FOG0004654
OrthoInspector 1 1.000 - - oto96373
orthoMCL 1 0.900 - - OOG6_104728
Panther 1 1.100 - - LDO PTHR44186
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3845
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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