Sequence 1: | NP_610636.1 | Gene: | BBS4 / 36167 | FlyBaseID: | FBgn0033578 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006252585.1 | Gene: | Tmtc4 / 290501 | RGDID: | 1560183 | Length: | 773 | Species: | Rattus norvegicus |
Alignment Length: | 293 | Identity: | 60/293 - (20%) |
---|---|---|---|
Similarity: | 113/293 - (38%) | Gaps: | 61/293 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 64 LNPEYLYFV-QGLIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREA 127
Fly 128 EQRSSRQDHEIYHYLGELLYRAATTQSQKDVAS------------QQQDEARTYFELAVQSGRKL 180
Fly 181 -ESYVRLAELYRKDKQYQKAIEILENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIE 244
Fly 245 RKC---SPKGLLAFGAILQSRNDIDGALSKYSQ-------IANAEPEIAELWNNIGLCFFKKQKF 299
Fly 300 IVAISSLRKSVWLSPLNYNALYNLSLIYIASEQ 332 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
BBS4 | NP_610636.1 | TPR_12 | 63..127 | CDD:290160 | 13/63 (21%) |
TPR repeat | 68..95 | CDD:276809 | 6/27 (22%) | ||
TPR_12 | 97..175 | CDD:290160 | 17/89 (19%) | ||
TPR repeat | 100..130 | CDD:276809 | 2/29 (7%) | ||
TPR repeat | 136..175 | CDD:276809 | 11/50 (22%) | ||
TPR repeat | 179..209 | CDD:276809 | 7/30 (23%) | ||
TPR_19 | 190..254 | CDD:291240 | 12/66 (18%) | ||
TPR repeat | 214..242 | CDD:276809 | 5/27 (19%) | ||
TPR repeat | 249..277 | CDD:276809 | 5/34 (15%) | ||
TPR_11 | 283..348 | CDD:290150 | 11/50 (22%) | ||
TPR repeat | 283..311 | CDD:276809 | 4/27 (15%) | ||
TPR repeat | 316..346 | CDD:276809 | 5/17 (29%) | ||
TPR repeat | 351..377 | CDD:276809 | |||
Tmtc4 | XP_006252585.1 | DUF1736 | 324..398 | CDD:285594 | |
TPR | 513..771 | CDD:223533 | 59/292 (20%) | ||
TPR_1 | 514..547 | CDD:278916 | 9/34 (26%) | ||
TPR repeat | 514..542 | CDD:276809 | 6/29 (21%) | ||
TPR_17 | 536..569 | CDD:290167 | 8/54 (15%) | ||
TPR repeat | 547..577 | CDD:276809 | 8/53 (15%) | ||
TPR_1 | 582..615 | CDD:278916 | 5/32 (16%) | ||
TPR repeat | 582..610 | CDD:276809 | 4/27 (15%) | ||
TPR repeat | 616..642 | CDD:276809 | 5/25 (20%) | ||
TPR repeat | 650..678 | CDD:276809 | 6/34 (18%) | ||
TPR repeat | 683..713 | CDD:276809 | 4/33 (12%) | ||
TPR_17 | 706..739 | CDD:290167 | 5/32 (16%) | ||
TPR repeat | 718..746 | CDD:276809 | 4/27 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1124 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |