Sequence 1: | NP_610636.1 | Gene: | BBS4 / 36167 | FlyBaseID: | FBgn0033578 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001346910.1 | Gene: | Spag1 / 26942 | MGIID: | 1349387 | Length: | 913 | Species: | Mus musculus |
Alignment Length: | 299 | Identity: | 57/299 - (19%) |
---|---|---|---|
Similarity: | 102/299 - (34%) | Gaps: | 96/299 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 149 AATTQSQKDVASQQQDEARTYFELAVQ-SGRKLESYVRLAELYRKDKQYQKAIEILENCLHLTPE 212
Fly 213 N-------SEVLIE------ISVLYLK-----INETQKAHDR---------------LAEVVSIE 244
Fly 245 RKC------------------------------------------------SPKGLLAFGAILQS 261
Fly 262 RNDIDGALSKYS-QIANAEP-------EIAELWNNIGLCFFKKQKFIVAISSLRKSVWLSPLNYN 318
Fly 319 ALYNLSLIYIASEQYASAF------HTLAAAINLRKDNA 351 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
BBS4 | NP_610636.1 | TPR_12 | 63..127 | CDD:290160 | |
TPR repeat | 68..95 | CDD:276809 | |||
TPR_12 | 97..175 | CDD:290160 | 6/25 (24%) | ||
TPR repeat | 100..130 | CDD:276809 | |||
TPR repeat | 136..175 | CDD:276809 | 6/25 (24%) | ||
TPR repeat | 179..209 | CDD:276809 | 7/29 (24%) | ||
TPR_19 | 190..254 | CDD:291240 | 22/144 (15%) | ||
TPR repeat | 214..242 | CDD:276809 | 10/53 (19%) | ||
TPR repeat | 249..277 | CDD:276809 | 9/28 (32%) | ||
TPR_11 | 283..348 | CDD:290150 | 15/70 (21%) | ||
TPR repeat | 283..311 | CDD:276809 | 5/27 (19%) | ||
TPR repeat | 316..346 | CDD:276809 | 7/35 (20%) | ||
TPR repeat | 351..377 | CDD:276809 | 1/1 (100%) | ||
Spag1 | NP_001346910.1 | 3a0801s09 | 214..698 | CDD:273380 | 57/299 (19%) |
TPR repeat | 229..253 | CDD:276809 | |||
TPR repeat | 258..287 | CDD:276809 | 6/26 (23%) | ||
TPR repeat | 292..320 | CDD:276809 | 6/27 (22%) | ||
TPR repeat | 445..471 | CDD:276809 | 7/25 (28%) | ||
TPR repeat | 483..513 | CDD:276809 | 5/29 (17%) | ||
TPR repeat | 518..546 | CDD:276809 | 6/27 (22%) | ||
TPR repeat | 619..646 | CDD:276809 | |||
PLN03088 | 631..>807 | CDD:215568 | |||
TPR repeat | 651..681 | CDD:276809 | |||
RPAP3_C | 789..878 | CDD:404718 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1124 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |