DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and Tmtc3

DIOPT Version :10

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001103483.1 Gene:Tmtc3 / 237500 MGIID:3036255 Length:920 Species:Mus musculus


Alignment Length:444 Identity:97/444 - (21%)
Similarity:172/444 - (38%) Gaps:77/444 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NIDWLLHIYFTRREFTRCRRLIERELNRHLNPEYLYFVQGLIDREEGNHIEALRHLQKSAELNPR 99
            |.||       ..|:|    |....|..:.|...|:...|.....|.|..:||::..::..:.|.
Mouse   430 NWDW-------ESEYT----LFMSALKVNKNNAKLWNNVGHALENEKNFEKALKYFLQATHVQPD 483

  Fly   100 NIETYKEIGRTLYIMGRFSQALGVFREAEQ-------------RSSRQDHEIYHYLGELLYRAAT 151
            :|..:..:|||...:.|..:|...:..|:.             |.:.....:|..|..|:....:
Mouse   484 DIGAHMNVGRTYKNLNRTREAEASYMLAKSLMPQIIPGKKYAARIAPNHLNVYINLANLIRANES 548

  Fly   152 TQSQKDVASQQQDEARTYFELAVQSGRKLESYVRLAELYRKDKQYQKAIEILENCLHLTPENSEV 216
            ...:.|...:|....|..|:         ::|:...||..|..:..||.|.....|.|...|:::
Mouse   549 RLEEADQLYRQAISMRPDFK---------QAYISRGELLLKMNKPLKAKEAYLKALELDRNNADL 604

  Fly   217 LIEISVLYLKI---NETQKAHDRLAEVVSIERKCSPKGLLAF---GAILQSRNDI---DGALSKY 272
            ...::::|:::   ||..|..:|..|:       :||..||.   ..::|...::   ..|..:.
Mouse   605 WYNLAIVYIELKEPNEALKNFNRALEL-------NPKHKLALFNSAILMQESGEVKLRPEARKRL 662

  Fly   273 SQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKSVWLSPLNYNALYNLSLIYIASEQYASAF 337
            ....|.||:.|..:.|:|:.....:|...|.|.::|::.|.|...:||:||:|:|..:.:...|.
Mouse   663 LNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKLQPDFRSALFNLALLYSQTAKELKAL 727

  Fly   338 HTLAAAINLRKDNAECYMLLG-LCLRKLDDMENAFVALERASSMATGQQGAGRNPLVVLNF---- 397
            ..|...:....|:.:..:|.| :.:.:..|:..|....|:...|..... .|::.|.|:.|    
Mouse   728 PILEELLKYYPDHTKGLILKGDILMNQKKDIPGAKKCFEKILEMDPSNV-QGKHNLCVVYFEEKE 791

  Fly   398 ---ALFC-YETGRLALSTEQYNRFMSQAQDLLLPTEYKFQATKLKSLLRISNQG 447
               |..| .||..||...|...|.:|..:|                  |||:.|
Mouse   792 LLKAERCLVETLALAPHEEYIQRHLSIVRD------------------RISSSG 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809 6/26 (23%)
LapB 70..347 CDD:442196 63/298 (21%)
TPR repeat 100..130 CDD:276809 7/42 (17%)
TPR repeat 136..175 CDD:276809 7/38 (18%)
TPR repeat 179..209 CDD:276809 8/29 (28%)
TPR repeat 214..242 CDD:276809 6/30 (20%)
TPR repeat 249..277 CDD:276809 6/33 (18%)
BepA 281..423 CDD:443813 37/150 (25%)
TPR repeat 283..311 CDD:276809 7/27 (26%)
TPR repeat 316..346 CDD:276809 8/29 (28%)
TPR repeat 351..377 CDD:276809 5/26 (19%)
Tmtc3NP_001103483.1 TMTC_DUF1736 263..336 CDD:462468
TPR 444..673 CDD:440225 49/244 (20%)
TPR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 451..484 7/32 (22%)
TPR repeat 451..479 CDD:276809 6/27 (22%)
TPR repeat 484..528 CDD:276809 7/43 (16%)
TPR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 485..518 7/32 (22%)
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 534..567 6/32 (19%)
TPR repeat 535..562 CDD:276809 5/26 (19%)
LapB 549..804 CDD:442196 61/271 (23%)
TPR repeat 567..597 CDD:276809 9/38 (24%)
TPR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 568..601 9/41 (22%)
TPR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 602..635 7/39 (18%)
TPR repeat 602..630 CDD:276809 5/27 (19%)
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 673..706 9/32 (28%)
TPR repeat 673..702 CDD:276809 7/28 (25%)
TPR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 707..740 8/32 (25%)
TPR repeat 707..735 CDD:276809 8/27 (30%)
TPR repeat 741..770 CDD:276809 5/28 (18%)
TPR 8. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 742..775 6/32 (19%)
TPR 9. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 776..809 10/33 (30%)
TPR repeat 776..799 CDD:276809 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 829..897
Blue background indicates that the domain is not in the aligned region.

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