Sequence 1: | NP_610636.1 | Gene: | BBS4 / 36167 | FlyBaseID: | FBgn0033578 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_030101676.1 | Gene: | Kdm6b / 216850 | MGIID: | 2448492 | Length: | 1642 | Species: | Mus musculus |
Alignment Length: | 331 | Identity: | 64/331 - (19%) |
---|---|---|---|
Similarity: | 111/331 - (33%) | Gaps: | 87/331 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 173 AVQSGRKLESYVRLAELYRKDKQYQKAIEILENCLHL--------------TPENSEVLIEISVL 223
Fly 224 YLKINETQKAHDRLAEVVSIERKCSPKGLLAFGAILQSRNDIDGALSKYSQIANAEPEIAELWNN 288
Fly 289 IGLCFFKKQKFIVAISSLRKSVWLSPLNYNALYNLSLIYIASEQYASAFHTLAAAINLRKDNAEC 353
Fly 354 YMLLGL-----CLRKLDDMENAFVALERASSMATGQQ----------------GAGRNPLVV--- 394
Fly 395 LNFALFCYETGRLALSTEQYNRFMSQAQDLLLPTEYKFQATKLKSLLRISNQGNGILLDSADMGE 459
Fly 460 SDLGHN 465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
BBS4 | NP_610636.1 | TPR_12 | 63..127 | CDD:290160 | |
TPR repeat | 68..95 | CDD:276809 | |||
TPR_12 | 97..175 | CDD:290160 | 0/1 (0%) | ||
TPR repeat | 100..130 | CDD:276809 | |||
TPR repeat | 136..175 | CDD:276809 | 0/1 (0%) | ||
TPR repeat | 179..209 | CDD:276809 | 9/29 (31%) | ||
TPR_19 | 190..254 | CDD:291240 | 14/77 (18%) | ||
TPR repeat | 214..242 | CDD:276809 | 5/27 (19%) | ||
TPR repeat | 249..277 | CDD:276809 | 6/27 (22%) | ||
TPR_11 | 283..348 | CDD:290150 | 12/64 (19%) | ||
TPR repeat | 283..311 | CDD:276809 | 4/27 (15%) | ||
TPR repeat | 316..346 | CDD:276809 | 7/29 (24%) | ||
TPR repeat | 351..377 | CDD:276809 | 6/30 (20%) | ||
Kdm6b | XP_030101676.1 | TPR repeat | 106..136 | CDD:276809 | |
JmjC | 1342..1406 | CDD:214721 | 13/46 (28%) | ||
JmjC | 1376..1484 | CDD:396791 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1124 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |