DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and utx-1

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001309685.1 Gene:utx-1 / 181110 WormBaseID:WBGene00017046 Length:1146 Species:Caenorhabditis elegans


Alignment Length:467 Identity:91/467 - (19%)
Similarity:165/467 - (35%) Gaps:137/467 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PTLEVVRPAPKMPSDANI-DWLLHIYFTRREFTRCRRLIERELNR-HL-NPE------YLYFV-- 72
            |.::...|.|:.....|. .||.....|..|..|.|.|.....:. |: ||.      .|:|.  
 Worm     9 PPMDESEPLPEERHPGNFKKWLELPLLTNYELERIRTLSSLSFDEFHVQNPADLTYQVRLFFAKA 73

  Fly    73 -QGLIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREAEQRSSRQDH 136
             |.|:     .:::.::.:.|:        ..||.|.|.::        .|:        ::|.|
 Worm    74 RQYLV-----RYVDEMKSIYKT--------HKYKTIERRIF--------YGL--------AKQCH 109

  Fly   137 EIY---HYLGEL-LYRAATTQSQKDVASQQQD----EARTYFELAVQSGRKLESYVRLAELYRKD 193
            .:.   .:.|.| ||        ::|.|...|    :...||.|.:              :|...
 Worm   110 VVLLANDWTGALELY--------QEVLSHHPDLFSHDPSMYFGLGL--------------VYLHF 152

  Fly   194 KQYQKAIEILENCLHLTPENSEVL---IEISVLYLKINETQKAHD--RLAEVVSIERKCSPKGLL 253
            ||::.|||.....|:..|.....|   :.:.|.|:::.:..:..:  :||...|.|....||..:
 Worm   153 KQWKPAIEAFTRLLYSFPTGMIALQAKVRLGVCYMELEDYNRCINLFKLAVNDSDESVFMPKFTI 217

  Fly   254 AFGAILQSRN--DIDGALSKYSQIANAEPEIAELWNNIGLCFFK----KQKFIVAIS----SLRK 308
            .:...|...|  :::.|.|:|..:      |.||..:|.....|    :|:..:.||    .||:
 Worm   218 KYNIALSHENNDELEIAESEYENL------ITELTQHISFLQSKSNVDQQQVDLLISVKAACLRQ 276

  Fly   309 SVWLS-----------------------------PLNYNALYNLSLIY------IASEQYASAFH 338
            ..|:|                             |.:..:.|.|..:|      ::.:....||.
 Worm   277 IGWISYRRSYKDDANRLDHLKKAQENLISAHDTDPRDGQSYYYLGRVYGEHEPSVSGQVAHDAFV 341

  Fly   339 TLAAAINLRKDNAECYMLLGLCLRK----LDDMENAFVALERASSMATGQQGAGRNPLVVLNF-- 397
            ....:|:.::.||:.:..:|...::    :|.::....|:|..|:.:......|.  |...|.  
 Worm   342 NYRFSIDKKEQNADTWCSIGALYQRQNQPIDALQAFICAIELNSTHSAAWTDLGE--LYEKNAQY 404

  Fly   398 --ALFCYETGRL 407
              ||.|::...|
 Worm   405 QDALECFKNAML 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 13/73 (18%)
TPR repeat 68..95 CDD:276809 5/29 (17%)
TPR_12 97..175 CDD:290160 17/85 (20%)
TPR repeat 100..130 CDD:276809 5/29 (17%)
TPR repeat 136..175 CDD:276809 11/46 (24%)
TPR repeat 179..209 CDD:276809 7/29 (24%)
TPR_19 190..254 CDD:291240 17/68 (25%)
TPR repeat 214..242 CDD:276809 5/32 (16%)
TPR repeat 249..277 CDD:276809 7/29 (24%)
TPR_11 283..348 CDD:290150 18/107 (17%)
TPR repeat 283..311 CDD:276809 9/35 (26%)
TPR repeat 316..346 CDD:276809 6/35 (17%)
TPR repeat 351..377 CDD:276809 5/29 (17%)
utx-1NP_001309685.1 TPR_11 138..204 CDD:290150 16/79 (20%)
TPR repeat 138..168 CDD:276809 10/43 (23%)
TPR repeat 176..203 CDD:276809 4/26 (15%)
TPR repeat 271..301 CDD:276809 4/29 (14%)
TPR repeat 315..348 CDD:276809 5/32 (16%)
TPR_11 353..419 CDD:290150 14/66 (21%)
TPR repeat 353..383 CDD:276809 5/29 (17%)
TPR_1 354..387 CDD:278916 6/32 (19%)
TPR repeat 388..415 CDD:276809 6/28 (21%)
TPR 390..419 CDD:197478 7/29 (24%)
JmjC 845..909 CDD:214721
JmjC 879..987 CDD:202224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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