DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS4 and ttc-7

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001254845.1 Gene:ttc-7 / 175332 WormBaseID:WBGene00021444 Length:971 Species:Caenorhabditis elegans


Alignment Length:586 Identity:109/586 - (18%)
Similarity:197/586 - (33%) Gaps:154/586 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GTEQINCNGRLIE--LPTLEVVR----PAPKMPSDA-NIDWLLHIYFTRREFTRC--RRLIEREL 60
            |..|....|.|:|  :..:.::|    .|.|:.|.. .|:|.       |:...|  .:.....|
 Worm   223 GVRQQEKIGELLERIMERVAIIRAKDTAAKKVSSGTEGIEWY-------RKIITCLGDKFTGERL 280

  Fly    61 NRHLNPEYL-YFVQGLIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYI-MGRFSQALGV 123
            .:.|:.::. ..::..:..||.:..||:       .....|::.|....:|.|. ..:..:.:.:
 Worm   281 KQKLSRQFAELLIRATVPIEEKSMSEAM-------HTKAMNMKLYHGSNKTFYTPKSKIEEIILL 338

  Fly   124 FREAEQRSSRQDHEIYHYLGELLYRAATTQSQKDVASQQQDEARTYFELAVQSGRKLESYVRLAE 188
            ....|..|:|:         .:|.|.....|.:.::.|   .|::.|.|.......:..|..||:
 Worm   339 LLINEVLSTRE---------VILSRTDDLSSSRTLSLQ---NAKSSFNLLTLVLSTINQYQLLAQ 391

  Fly   189 LYRKDK---------------------QYQKAIEILENCLHLTPENSEVLIEISVLYLKI---NE 229
            :|.:..                     ::.:||.:.|..:..:...||.|...:.....|   |.
 Worm   392 IYERAMKFANNDSFLWQQFALSAICCGRFSRAIRVFEQSILASTIASESLTSSASSTSSISSQNS 456

  Fly   230 TQKAHD----------------------------------RLAEVVSIER--------------- 245
            |.||.:                                  .:...|.|||               
 Worm   457 TSKAQNLHQNRRPKSPDSAMFSSLKLTNNPSCALSVISEYMMISQVLIERFGNYEPAIEYASKAV 521

  Fly   246 -KCSPKGLLAFGAILQSRNDIDGALSKYSQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKS 309
             .||.:|.|:|   |::|..:..|:: |...|:.||.    |:      .||.:....:..:.:.
 Worm   522 DLCSKEGQLSF---LKARCQLLHAIA-YGFRASEEPS----WD------LKKAQLAKTVQLIEEC 572

  Fly   310 VWLSPLNYNALYNLSLIYIASEQYASAFHTLAAAINLRKDNAECYMLLGLCLRKLDDMENAFVAL 374
            |.:...:|.:||..:..:..|....||....:.::.|..|.....|||.|......|::.|...:
 Worm   573 VSIDAHDYLSLYYAAYFHAISRDLESAKDRCSRSLALNGDQPAAIMLLALIFTAYGDLKGALDLV 637

  Fly   375 ERASSMATGQQGAGRNPLVVLNFALFCYET--GRLALSTEQYNRFMS-------QAQDLLLPTEY 430
              .:|:|..:...|   |:||...:   ||  ||:..|.:..:..:.       ..|.|......
 Worm   638 --INSLAEFEHNYG---LMVLRLHI---ETKFGRIEESLDTCSHLLDFWKKQPPVQQQLAYSGGI 694

  Fly   431 KFQATKLKSLLRISNQ--GNGILLDSADMGESDLGHN-----RATELLPDELPLE-----VNAVV 483
            ..:....:::...:.|  |.|....|...|...||..     ..|.|:|...||.     ::|:.
 Worm   695 LDEERSQRTINGAAEQLFGGGGATPSQKTGTPSLGRELSTPLATTPLIPMNFPLSSALPVISAIP 759

  Fly   484 S 484
            |
 Worm   760 S 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 9/65 (14%)
TPR repeat 68..95 CDD:276809 4/27 (15%)
TPR_12 97..175 CDD:290160 14/78 (18%)
TPR repeat 100..130 CDD:276809 5/30 (17%)
TPR repeat 136..175 CDD:276809 7/38 (18%)
TPR repeat 179..209 CDD:276809 7/50 (14%)
TPR_19 190..254 CDD:291240 19/137 (14%)
TPR repeat 214..242 CDD:276809 8/64 (13%)
TPR repeat 249..277 CDD:276809 7/27 (26%)
TPR_11 283..348 CDD:290150 11/64 (17%)
TPR repeat 283..311 CDD:276809 3/27 (11%)
TPR repeat 316..346 CDD:276809 6/29 (21%)
TPR repeat 351..377 CDD:276809 6/25 (24%)
ttc-7NP_001254845.1 PEP_TPR_lipo 508..>951 CDD:274350 57/275 (21%)
TPR repeat 579..609 CDD:276809 6/29 (21%)
TPR repeat 808..836 CDD:276809
TPR repeat 888..915 CDD:276809
TPR repeat 920..950 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165721
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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