DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment BBS4 and LOC110438537

DIOPT Version :9

Sequence 1:	NP_610636.1	Gene:	BBS4 / 36167	FlyBaseID:	FBgn0033578	Length:	486	Species:	Drosophila melanogaster
Sequence 2:	XP_021326752.1	Gene:	LOC110438537 / 110438537	-ID:	-	Length:	156	Species:	Danio rerio

Alignment Length:	152	Identity:	67/152 - (44%)
Similarity:	105/152 - (69%)	Gaps:	1/152 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly   206 CLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPKGLLAFGAILQSRNDIDGALS 270
            |:..:|||:|:|..:.:||::..:.|||.:.|...::.:.. :.|.:||.|:::|:..|.|.|::
Zfish     5 CVRFSPENTELLTTLGLLYMQFGKYQKAFEHLGNALTYDPN-NFKAILAAGSMMQTHGDYDVAMN 68

  Fly   271 KYSQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKSVWLSPLNYNALYNLSLIYIASEQYAS 335
            ||...|.|.||...||||||:|||.|:|::.|||.|:::.:|||.::..||||.|:::..:|:||
Zfish    69 KYRVAAYAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLSPFDWKILYNLGLVHLTMQQFAS 133

  Fly   336 AFHTLAAAINLRKDNAECYMLL 357
            |||.|:||||||...:|.||||
Zfish   134 AFHFLSAAINLRPRMSELYMLL 155

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
BBS4	NP_610636.1	TPR_12	63..127	CDD:290160
		TPR repeat	68..95	CDD:276809
		TPR_12	97..175	CDD:290160
		TPR repeat	100..130	CDD:276809
		TPR repeat	136..175	CDD:276809
		TPR repeat	179..209	CDD:276809	1/2 (50%)
		TPR_19	190..254	CDD:291240	13/47 (28%)
		TPR repeat	214..242	CDD:276809	8/27 (30%)
		TPR repeat	249..277	CDD:276809	10/27 (37%)
		TPR_11	283..348	CDD:290150	35/64 (55%)
		TPR repeat	283..311	CDD:276809	15/27 (56%)
		TPR repeat	316..346	CDD:276809	15/29 (52%)
		TPR repeat	351..377	CDD:276809	5/7 (71%)
LOC110438537	XP_021326752.1	TPR_11	23..>154	CDD:330823	57/131 (44%)
		TPR repeat	48..75	CDD:276809	10/26 (38%)
		TPR repeat	80..110	CDD:276809	15/29 (52%)
		TPR repeat	115..142	CDD:276809	13/26 (50%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D334820at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010