DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BBS4 and Bbs4

DIOPT Version :9

Sequence 1:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_780534.1 Gene:Bbs4 / 102774 MGIID:2143311 Length:520 Species:Mus musculus


Alignment Length:446 Identity:148/446 - (33%)
Similarity:244/446 - (54%) Gaps:37/446 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GRLIELP-TLEVVRP----APKMPSDANIDWLLHIYFTRREFTRCRRLIERELNRHLN-PEYLYF 71
            |...::| ::|..:|    ||..|.....:||:|:::.|:::..|:.:|:.:|..... .||..:
Mouse     7 GMKTQVPASVESQKPRSKKAPDFPIVEKQNWLIHLHYIRKDYEACKAVIKEQLQETQGLCEYAIY 71

  Fly    72 VQGLIDREEGNHIEALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREAEQRSSRQDH 136
            ||.||.|.|||..|:|...|..|.|:|:..:..|::.|:|:::|:...|..|:.|| .:.:::|.
Mouse    72 VQALIFRLEGNIQESLELFQTCAVLSPQCADNLKQVARSLFLLGKHKAATEVYNEA-AKLNQKDW 135

  Fly   137 EIYHYLGELLYRAATTQSQKDVASQQQDEARTYFELAVQSGRKLESYVRLAELYRKDKQYQKAIE 201
            ||.|.|| :.|          ...:|.::|:.....|:|..:...:|:.|.:::.......||||
Mouse   136 EICHNLG-VCY----------TYLKQFNKAQDQLHSALQLNKHDLTYIMLGKIHLLQGDLDKAIE 189

  Fly   202 ILENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPKGLLAFGAILQSRNDID 266
            |.:..:..:|||:|:|..:.:|||::...|||.:.|...::.: ..:.|.:||.|:::|:..|.|
Mouse   190 IYKKAVEFSPENTELLTTLGLLYLQLGVYQKAFEHLGNALTYD-PANYKAILAAGSMMQTHGDFD 253

  Fly   267 GALSKYSQIANAEPEIAELWNNIGLCFFKKQKFIVAISSLRKSVWLSPLNYNALYNLSLIYIASE 331
            .||:||..:|.|.||...||||||:|||.|:|::.|||.|:::.:|:|.::..||||.|:::..:
Mouse   254 VALTKYRVVACAIPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQ 318

  Fly   332 QYASAFHTLAAAINLRKDNAECYMLLGLCLRKLDDMEN---AFVALERASSMATGQQGAGRNPLV 393
            |||||||.|:||||.:....|.||||.:.|..|:|:||   |:|...|....         ||||
Mouse   319 QYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENARRAYVEAVRLDKC---------NPLV 374

  Fly   394 VLNFALFCYETGRLALSTEQYN------RFMSQAQDLLLPTEYKFQATKLKSLLRI 443
            .||:|:..|..|....:..||.      .|:.....|...:|....|.||.:.|::
Mouse   375 NLNYAVLLYNQGEKKSALAQYQEMEKKVNFLKDNSPLEFDSEMVEMAQKLGAALQV 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS4NP_610636.1 TPR_12 63..127 CDD:290160 22/64 (34%)
TPR repeat 68..95 CDD:276809 12/26 (46%)
TPR_12 97..175 CDD:290160 19/77 (25%)
TPR repeat 100..130 CDD:276809 8/29 (28%)
TPR repeat 136..175 CDD:276809 9/38 (24%)
TPR repeat 179..209 CDD:276809 7/29 (24%)
TPR_19 190..254 CDD:291240 18/63 (29%)
TPR repeat 214..242 CDD:276809 9/27 (33%)
TPR repeat 249..277 CDD:276809 11/27 (41%)
TPR_11 283..348 CDD:290150 34/64 (53%)
TPR repeat 283..311 CDD:276809 15/27 (56%)
TPR repeat 316..346 CDD:276809 16/29 (55%)
TPR repeat 351..377 CDD:276809 12/28 (43%)
Bbs4NP_780534.1 Required for localization to centrosomes. /evidence=ECO:0000250 1..66 14/58 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 4/18 (22%)
TPR 1 67..100 16/32 (50%)
TPR repeat 68..95 CDD:276809 12/26 (46%)
Interaction with PCM1. /evidence=ECO:0000250 101..337 87/248 (35%)
TPR_11 101..166 CDD:290150 19/76 (25%)
TPR repeat 101..129 CDD:276809 8/28 (29%)
TPR repeat 134..164 CDD:276809 10/40 (25%)
TPR_11 136..199 CDD:290150 17/73 (23%)
TPR_11 169..233 CDD:290150 19/64 (30%)
TPR repeat 169..196 CDD:276809 7/26 (27%)
TPR 170..201 CDD:197478 8/30 (27%)
TPR repeat 202..229 CDD:276809 9/26 (35%)
TPR repeat 236..264 CDD:276809 11/27 (41%)
TPR_11 237..301 CDD:290150 31/63 (49%)
TPR repeat 270..298 CDD:276809 15/27 (56%)
TPR_11 272..335 CDD:290150 34/62 (55%)
TPR repeat 303..333 CDD:276809 16/29 (55%)
TPR_11 305..369 CDD:290150 30/63 (48%)
Required for localization to centrosomes. /evidence=ECO:0000250 338..520 31/102 (30%)
TPR repeat 338..366 CDD:276809 12/27 (44%)
TPR_16 342..400 CDD:290168 22/66 (33%)
TPR repeat 372..397 CDD:276809 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 488..520
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I9003
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13197
Inparanoid 1 1.050 237 1.000 Inparanoid score I3383
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56334
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004654
OrthoInspector 1 1.000 - - oto92819
orthoMCL 1 0.900 - - OOG6_104728
Panther 1 1.100 - - LDO PTHR44186
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2422
SonicParanoid 1 1.000 - - X3845
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.860

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