DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Spn47C and AT2G35580

DIOPT Version :9

Sequence 1:	NP_001163116.1	Gene:	Spn47C / 36163	FlyBaseID:	FBgn0033574	Length:	382	Species:	Drosophila melanogaster
Sequence 2:	NP_181101.1	Gene:	AT2G35580 / 818123	AraportID:	AT2G35580	Length:	374	Species:	Arabidopsis thaliana

Alignment Length:	385	Identity:	95/385 - (24%)
Similarity:	161/385 - (41%)	Gaps:	67/385 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    27 NDEV-----PPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAESWTDE 86
            ||.|     |.:|:::|...|.|.       ....:||::.|.|....::|.........:....
plant    25 NDIVLRLTAPLINVILSIIAASSP-------GDTDTADKIVSLLQASSTDKLHAVSSEIVTTVLA 82

  Fly    87 CSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSV-KKVNKWLEKHTF 150
            .|.|..|..:.....|::.:...:...|.|:.|..:.|....:::....|.| ::||.|:||.|.
plant    83 DSTASGGPTISAANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTN 147

  Fly   151 YTVRNLFTPEVFNSDSSV----ILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVSMMRQIG 211
            ..:.||...   |..|:.    |..|:|||..:|:..|...||:..||.:....::.|..|.
plant   148 GLITNLLPS---NPKSAPLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFMT--- 206

  Fly   212 QFRYGESKKLKS-----QILQLPFERS-----NLTMMIILPTAIDGLPELEEKL----GQLDMNE 262
                |.|.:...     :::.|.:.|.     :.:|.|.||...||||.:.|:|    |.|..||
plant   207 ----GASCRYTHVYEGFKVINLQYRRGREDSRSFSMQIYLPDEKDGLPSMLERLASTRGFLKDNE 267

  Fly   263 V--AAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARHK 325
            |  :..:::||  :.||:|:.:               ..|:|.:|...  |.:..|  :|...||
plant   268 VLPSHSAVIKE--LKIPRFKFD---------------FAFEASEALKG--FGLVVP--LSMIMHK 311

  Fly   326 VFLNVTEFGCEVAPEAEVQPEVLKKNPDRKF-FKADRPFVFAIRDRKN--VYFVGHFVKP 382
            ..:.|.|.|.:.|..|..:....::.|..|. |.||.||:|.:::.::  |.|:|..:.|
plant   312 SCIEVDEVGSKAAAAAAFRGIGCRRPPPEKHDFVADHPFLFIVKEYRSGLVLFLGQVMDP 371

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Spn47C	NP_001163116.1	SERPIN	18..379	CDD:238101	94/380 (25%)
AT2G35580	NP_181101.1	plant_SERPIN	8..371	CDD:238998	94/383 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11461
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X28
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010