DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and SRP2

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:384 Identity:89/384 - (23%)
Similarity:158/384 - (41%) Gaps:79/384 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAESWTDECSCAKK------ 92
            |.:.|||...:.:|:.......|:   ||| .||.....|...:.:| .:.:..|...|      
plant    58 NCVFSPASINAVLTVTAANTDNKT---LRS-FILSFLKSSSTEETNA-IFHELASVVFKDGSETG 117

  Fly    93 GVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSVK-KVNKWLEKHTFYTVRNL 156
            |..:..|..:::.:......|:.|:.|.||.|....:::.:..:.|: .||.|..:||...::.:
plant   118 GPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEI 182

  Fly   157 FTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVSMMRQIGQFRYGESKKL 221
            .......|.::.|..|:|:|:..|.|.|.:.:|:...|.:...:.:.|..||..      |.:.:
plant   183 LPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFMRSY------EKQFI 241

  Fly   222 KS----QILQLPFERS------NLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSLMKEV---- 272
            ::    ::|:||:.:.      ..:|.:.||          :|.|:||       :|::.:    
plant   242 EAYDGFKVLRLPYRQGRDDTNREFSMYLYLP----------DKKGELD-------NLLERITSNP 289

  Fly   273 ---DVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARHKVFLNVTEFG 334
               |..||::|:: ..|.::|  |..|...|:|... .:| ||:..     ....|..:.:.|.|
plant   290 GFLDSHIPEYRVD-VGDFRIP--KFKIEFGFEASSV-FND-FELNV-----SLHQKALIEIDEEG 344

  Fly   335 CEVAPEAEV---------QPEVLKKNPDRKFFKADRPFVFAIRDRK--NVYFVGHFVKP 382
            .|.|....|         :|   ||..|   |.||.||:|.||:.|  .:.|.|....|
plant   345 TEAAAATTVVVVTGSCLWEP---KKKID---FVADHPFLFLIREDKTGTLLFAGQIFDP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 88/379 (23%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 88/382 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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