DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Serpind1

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_077358.1 Gene:Serpind1 / 79224 RGDID:619854 Length:479 Species:Rattus norvegicus


Alignment Length:385 Identity:107/385 - (27%)
Similarity:185/385 - (48%) Gaps:41/385 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FARNLFRALNDEVPPV-NMMVSPAGARSAMTLVFMGAGGKSADELRSKL----ILGVSNKSEVAK 77
            ||.||:|.|.|:.... |:.::|.|..:||.::.:|..|::.:|:.|.|    .:..|:|.||..
  Rat   113 FAFNLYRVLKDQATSSDNIFIAPVGISTAMGMISLGLRGETHEEVHSVLHFKDFVNASSKYEVTT 177

  Fly    78 QH--AESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSVKK 140
            .|  ....|........|..|:.|..||:.::..||.||.....||:.|||...::.:|. .:.|
  Rat   178 IHNLFRKLTHRLFRRNFGYTLQSVNDLYIQKQFPIREDFKAAMREFYFAEAQEADFSDPA-FISK 241

  Fly   141 VNKWLEKHTFYTVRNLFTPEVFNSDSS--VILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRME 203
            .|    .|.....:.|....:.|:||:  ::::|.::|:..|...||.::|...:|.:|.|:.::
  Rat   242 AN----SHILKLTKGLIKEALENTDSATQMMILNCIYFKGAWMNKFPVEMTHNHNFRLNEREVVK 302

  Fly   204 VSMMRQIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSL 268
            ||||:..|.|.....::|...||||.:. ..::|:|::|..:.|:..||.:|.. .:.|...||:
  Rat   303 VSMMQTKGNFLAANDQELDCDILQLEYV-GGISMLIVIPRKLSGMKTLEAQLTP-QVVERWQKSM 365

  Fly   269 MKEV-DVTIPKFRIECTVDLKVPLQKMGINSVFD-----AGQAD---LSDLFEMKTPQKISEARH 324
            .... :|.:|||::|...:|...|:.|||..:|:     :|.:|   :.|||           :|
  Rat   366 TNRTREVLLPKFKLEKNYNLVEVLKSMGITKLFNKNGNMSGISDQRIIIDLF-----------KH 419

  Fly   325 KVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAIRDRKN--VYFVGHFVKP 382
            :..:.|.|.|.:.|....|....|.   .:..|..||||:|.:.:.:.  :.|:|....|
  Rat   420 QSTITVNEEGTQAAAVTTVGFMPLS---TQVRFTVDRPFLFLVYEHRTSCLLFMGRVANP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 106/383 (28%)
Serpind1NP_077358.1 serpinD1_HCF2 33..479 CDD:381004 107/385 (28%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 55..79
Glycosaminoglycan-binding site. /evidence=ECO:0000250 172..192 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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