DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn47C and Serpina5

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001231668.1 Gene:Serpina5 / 65051 RGDID:619817 Length:442 Species:Rattus norvegicus


Alignment Length:383 Identity:101/383 - (26%)
Similarity:185/383 - (48%) Gaps:12/383 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASGGTTAPSLSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLI 66
            :|.|....|.|..   ||..|:|||..|.|..|:..||.....::.::.:|:|.|:..::...|.
  Rat    70 SSVGAVGTSRSRD---FAFRLYRALASEAPGQNVFFSPMSVSMSLGMLSLGSGLKTKAQILEGLG 131

  Fly    67 LGV-SNKSEVAKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLN 130
            |.: ..:.::..:..:....:.|....|:.|.|.:.|:.:....||..|.......:.::.:|.|
  Rat   132 LSLQQGQEDMLHKGFQQLLQQFSQPSDGLQLSLGSALFTDPAVHIRDHFLSAMKTLYMSDMFSTN 196

  Fly   131 YLNPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFW 195
            :.|||.:.|::|.::.|.|...:.:|.  :..:|...:::||.:||:|||...|....|...|:.
  Rat   197 FGNPESAKKQINDYVAKKTNGKIVDLI--KDLDSTHVMVVVNYIFFKAKWQTAFSSTNTHKMDYH 259

  Fly   196 INPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDG-LPELEEKLGQLD 259
            :.|::.::|.||.:...:.|...:.:...::.:|:: .|...:.|||:  :| :..:|:.|.:..
  Rat   260 VTPKKTIQVPMMNREDIYSYILDQNISCTVVGIPYQ-GNTFALFILPS--EGKMKRVEDGLDERT 321

  Fly   260 MNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARH 324
            :.........:::|:.:|||.||.|..|:..|.|:||..:|.. .||||.|.: .|..|:||..|
  Rat   322 LRNWLKMFTKRQLDLYLPKFSIEGTYKLEKILPKLGIQDIFTT-HADLSGLTD-HTNIKLSEMVH 384

  Fly   325 KVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAIRDRKNVYFVGHFVKP 382
            |..:.|.|.|...|....:...:....|.....:..|||:..|.|..|:||:|..::|
  Rat   385 KSMVEVDESGTTAAASTGILFTLRSARPSSLKVEFTRPFLVVIMDGTNLYFIGKVIQP 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 96/370 (26%)
Serpina5NP_001231668.1 serpin 79..442 CDD:476815 97/372 (26%)

Return to query results.
Submit another query.