DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and serpina3m

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001025693.1 Gene:serpina3m / 595085 XenbaseID:XB-GENE-6453454 Length:413 Species:Xenopus tropicalis


Alignment Length:315 Identity:65/315 - (20%)
Similarity:113/315 - (35%) Gaps:104/315 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 WTEANRTSKASSTTQDDFEGNAELLGDNEDSTGSFHALCMVAQGAGFEKIEDLLSLDTTVLKIIY 118
            :|:|....||:..|         |...:|.|:....     .|....:|::|.:::....: :|:
 Frog   233 YTDATEDRKAAFET---------LQVKDEKSSKEIE-----VQMKKIQKLQDAITISKGKI-MIH 282

  Fly   119 TSQTE---QYQLNASNLVRFDHLRELHVQSLQAQ------LLRFSLDAELPVARLH--------- 165
            :.::|   :|..|...|| ...||:|..|..||:      |:|.:|::...:..|.         
 Frog   283 SRESEDENRYIRNDKELV-LVQLRKLKAQRTQARAASQKNLVRLTLESNATLKALRKIVDKGEKI 346

  Fly   166 LESLELVR---TEPPTVLDRTQPSLTGLGLQSSPDTTAYQIVATDEEEEIVVDGSNGADSLTETF 227
            |:..|:.|   ||...||                  ..|..|.|.:|:|.:  ..|..:.|||..
 Frog   347 LKLAEICRKFETEEEKVL------------------PFYSSVLTPKEQEGI--QKNNLEELTEEL 391

  Fly   228 ELEIVPY----EVYKRELASTSNVSFYGWSNLTALSIHDCQLESLHPDFLYGLDRLQRLSLQHNN 288
            ...:|.|    ..:||                                  |...:|::|||||..
 Frog   392 TKVMVDYIGMENFWKR----------------------------------YNKVKLEQLSLQHRR 422

  Fly   289 LKILPPFAFYGAPNMRLLSLANNRL--LEVSYYSLAGLLELQVLDLSANNISKVS 341
            .::|.       .|.:|..:....|  :.||...|:.|..|.:::..:|.:..:|
 Frog   423 AQLLD-------INGKLREMLKQYLDGISVSDEVLSQLNPLFIVNYQSNLLQPLS 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 65/315 (21%)
serpina3mNP_001025693.1 serpinA 43..410 CDD:381073 48/246 (20%)

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