DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and serpind1

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:390 Identity:106/390 - (27%)
Similarity:187/390 - (47%) Gaps:24/390 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GGTTAPSLSASPIVFARNLFRAL-NDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADE----LRS 63
            |.|....||.....|..||:||: |:.....|::::|.|..:||..:.:|..|::.|:    |..
 Frog   105 GKTRVQRLSIINANFGFNLYRAIKNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGF 169

  Fly    64 KLILGVSNKSEVAKQH--AESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEA 126
            |..:..|:|.|:...|  ....|........|..||.|..:||.::..||..|.:....::.|||
 Frog   170 KNFINASSKYEILTLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDFVIREPFKNNLKNYYFAEA 234

  Fly   127 YSLNYLNPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSS--VILVNSLFFRAKWNKIFPQQLT 189
            ..::: ..:|.:.|.||.:::.|    :.|....:.|.|.:  ::|||.::|:..|...||.:.|
 Frog   235 QMVDF-GSKDFLTKANKRIQQLT----KGLIKEALTNVDPALLMLLVNCIYFKGTWENKFPVEYT 294

  Fly   190 QIDDFWINPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEK 254
            |..:|.:|.::.::|.||:..|.|......:|...:||||:. .|::|:|:||..:.|:..||::
 Frog   295 QNMNFRLNEKELVKVPMMKTKGNFLVAADPELDCAVLQLPYV-GNISMLIVLPHKLSGMKLLEKQ 358

  Fly   255 LGQLDMNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKI 319
            :....:.........:..:|.:|:|::|.:.:|:..|..||:..:|..|  |.|.:.:..  ..|
 Frog   359 ISPQVVERWQNIMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLFTHG--DFSGVSDKN--MNI 419

  Fly   320 SEARHKVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAIRDRKN--VYFVGHFVKP 382
            ...:|:..:.|.|.|.|.|....|....|.   .:..|.|||||:|.|.:.:.  :.|:|....|
 Frog   420 GLFQHQGTITVNEEGTEAAAVTVVGFMPLS---TQARFVADRPFLFLIYEHRTNCLIFMGRVANP 481

  Fly   383  382
             Frog   482  481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 101/371 (27%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 106/390 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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