DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Spn88Ea

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster


Alignment Length:409 Identity:97/409 - (23%)
Similarity:180/409 - (44%) Gaps:73/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAES 82
            ||.::...:....|..|:..||.....|:.|.:.|:.|.:..||...|.|              .
  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHL--------------D 93

  Fly    83 WTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNA---------------------EA 126
            |.|         :..:|...|:.|:...:...:.|.|||.:|                     |.
  Fly    94 WAD---------SKEVVRSAYILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEV 149

  Fly   127 YSLNYLN-PEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQ 190
            ..:::.: .|:|.|::|.|:.|.|...:||:.:.:.....:.::|.|:.:.:.:|...|..:.|.
  Fly   150 QQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTV 214

  Fly   191 IDDFWINPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPF---------------ERSNLTMMII 240
            ...|:.:|.....||||:|.|.|.....::|::.:||||:               |.|:::|::|
  Fly   215 PMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLI 279

  Fly   241 LPTAIDGLPELEEKLGQLD---MNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDA 302
            ||.....  .||:.|.:|:   :::...:::.:|::|::|||..|..::|...|.|||::.:||.
  Fly   280 LPPFNSN--SLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDE 342

  Fly   303 GQADLSDLFEMKTPQKIS--EARHKVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVF 365
            ..|...||    |.:.||  :::|...:.|.|.|...|....:......:..:...|:.:.||:|
  Fly   343 SVATFDDL----TSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLF 403

  Fly   366 AIRDR--KNVYFVGHFVKP 382
            .|.||  :::.|.|.:..|
  Fly   404 VIYDRTSRSILFTGIYRDP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 96/404 (24%)
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 96/404 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446290
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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