DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn47C and serpinb6

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001007932.1 Gene:serpinb6 / 493311 XenbaseID:XB-GENE-1001870 Length:379 Species:Xenopus tropicalis


Alignment Length:397 Identity:105/397 - (26%)
Similarity:194/397 - (48%) Gaps:44/397 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSE 74
            ||||:...||.|..:.:|:.....|:.|||....||:::|.:||.|.:|.::...|.|   :|.:
 Frog     3 SLSAANGTFAINFLKKINESNKTGNIFVSPLSISSALSMVLLGAKGNTATQMSQVLKL---DKVD 64

  Fly    75 VAKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNY-LNPEDSV 138
            .|..:.:|...|.:.:.....||...|||..:......:|.....:.::|:..:::: ...|:|.
 Frog    65 DAHCNFQSLISEINKSGTNYLLRTANRLYGEKSYTFLEEFLGSTQKHYHADLKAVDFSRKAEESR 129

  Fly   139 KKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRME 203
            .::|:|:.:.|...:::|.:....:|.:.::|||:::|:..|...|....|....|.:|..:...
 Frog   130 GEINEWVAQKTEGKIKDLLSSGSVDSLTRLVLVNAIYFKGNWANKFNPDHTHESPFRLNKNETKP 194

  Fly   204 VSMMRQIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAID----GLPELEEKLGQLDMNEVA 264
            |.||.:..:|......:|.::::::|:..:.|:|:|:||..|:    ||..||::|......:..
 Frog   195 VQMMFKKAKFPMTYIGELFTKVVEIPYVDNELSMIILLPDDINDGTTGLEALEKELTYEKFLKWT 259

  Fly   265 AKSLM--KEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLS------DLFEMKTPQKISE 321
            ...:|  .|:::::|||::|...||:..|..||::..||..:||.|      |||       :|:
 Frog   260 NPEMMDITEMELSLPKFKLEDDYDLESFLSTMGMSDAFDQRRADFSGMSSANDLF-------LSK 317

  Fly   322 ARHKVFLNVTEFGCEVAPE---------AEVQPEVLKKNPDRKFFKADRPFVFAI--RDRKNVYF 375
            ..||.|::|.|.|.|.|..         |.:.|.::          .|.||:|.|  |..:::.|
 Frog   318 VLHKSFVDVNEEGTEAAAATAAIMMLRCAMIIPRIV----------CDHPFLFFILHRPSQSILF 372

  Fly   376 VGHFVKP 382
            .|.|..|
 Frog   373 CGRFALP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 101/392 (26%)
serpinb6NP_001007932.1 serpinB 7..376 CDD:381072 99/388 (26%)

Return to query results.
Submit another query.