DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Spn47C and Spn85F

DIOPT Version :9

Sequence 1:	NP_001163116.1	Gene:	Spn47C / 36163	FlyBaseID:	FBgn0033574	Length:	382	Species:	Drosophila melanogaster
Sequence 2:	NP_649965.2	Gene:	Spn85F / 41221	FlyBaseID:	FBgn0037772	Length:	640	Species:	Drosophila melanogaster

Alignment Length:	176	Identity:	46/176 - (26%)
Similarity:	72/176 - (40%)	Gaps:	44/176 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   213 FRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSLMKE------ 271
            ::|.|  .||..:|:|..:.....:||:||   |...::......|.:....  .||::
  Fly   471 YKYFE--HLKMSVLELELDTPEYNLMILLP---DYHTDIVAAAASLKLGPTL--RLMRKQLKPRW 528

  Fly   272 VDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARH-KVFLNVT---- 331
            |...||.|::..|:.|...||.|||..||:..:||    |...|.:|....|| :..::||
  Fly   529 VQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRAD----FRPMTEEKGVYVRHIEQSIDVTIRTH 589

  Fly   332 -------EFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAIRDR 370
                   .:|.:..|   :|..|            :.||:|.|.||
  Fly   590 PINQLKRNYGAQSKP---IQISV------------NHPFLFFIVDR 620

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Spn47C	NP_001163116.1	SERPIN	18..379	CDD:238101	46/176 (26%)
Spn85F	NP_649965.2	SERPIN	88..>204	CDD:294093
Spn85F	NP_649965.2	SERPIN	<450..634	CDD:294093	46/176 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11461
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100