DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Serpinb3c

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_958751.2 Gene:Serpinb3c / 381286 MGIID:1277952 Length:386 Species:Mus musculus


Alignment Length:395 Identity:107/395 - (27%)
Similarity:203/395 - (51%) Gaps:49/395 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAES 82
            |...::|.|.:.  ..|:..||....:|:.::.:||.|.:  |::.:.:|..:..:|...:.:..
Mouse    11 FTVEMYRQLRES--DKNIFYSPISMITALGMLKLGAKGNT--EIQIEKVLQCNETTEKTTEKSAH 71

  Fly    83 WTDECSCAKKGVALRLVTRLYVNEEE----------------KIRTDFNDMALEFFNAEAYSLNY 131
            ..||.:..::  ..:|:|:|..:.::                .::|...|:. |:::|...||::
Mouse    72 CDDEDNVHEQ--FQKLITQLNKSNDDYDLKAANSIYGAKGFPLLQTFLEDIK-EYYHANVESLDF 133

  Fly   132 LN-PEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFW 195
            .: .|:|.||:|.|::..|...:::||.....:|.:.::|||:::|:.:||..|.:..|..:.||
Mouse   134 EHAAEESEKKINFWVKNETNGKIKDLFPSGSLSSSTKLVLVNAVYFKGRWNHKFDENNTIEEMFW 198

  Fly   196 INPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDM 260
            :|....:.|.||:|..:|.:...:.:::||:::|::...|:|.::||..||||.:||::|     
Mouse   199 LNKNTSIPVPMMKQRNKFMFSFLEDVQAQIVEIPYKGKELSMFVLLPMEIDGLKQLEKQL----- 258

  Fly   261 NEVAAKSL---------MKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTP 316
              .|||.|         :.|:.:.:|:|::|...||.|||:.||:.:.||..:||.|.   |.:.
Mouse   259 --TAAKLLEWTRAENMHLTELYLWLPRFKVEEKYDLPVPLECMGMVNAFDPQKADFSG---MSST 318

  Fly   317 Q--KISEARHKVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAIRDRK--NVYFVG 377
            |  .:|:..||.|:.|.|.|.|..|.:  ..||:.:......|:.|.||:|.|...|  ::.|.|
Mouse   319 QGLVVSKVLHKSFVEVNEEGTEADPAS--GEEVILRLAQVADFRCDHPFLFFIIHSKTNSILFFG 381

  Fly   378 HFVKP 382
            ....|
Mouse   382 RISSP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 106/390 (27%)
Serpinb3cNP_958751.2 SERPIN 6..386 CDD:294093 106/393 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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